| StochKit2: software for discrete stochastic simulation of biochemical systems with events KR Sanft, S Wu, M Roh, J Fu, RK Lim, LR Petzold Bioinformatics 27 (17), 2457-2458, 2011 | 173 | 2011 |
| Accelerated maximum likelihood parameter estimation for stochastic biochemical systems BJ Daigle, MK Roh, LR Petzold, J Niemi BMC bioinformatics 13 (1), 1-18, 2012 | 67 | 2012 |
| Automated estimation of rare event probabilities in biochemical systems BJ Daigle Jr, MK Roh, DT Gillespie, LR Petzold The Journal of chemical physics 134 (4), 01B628, 2011 | 62 | 2011 |
| The seasonality of diarrheal pathogens: A retrospective study of seven sites over three years DL Chao, A Roose, M Roh, KL Kotloff, JL Proctor PLoS neglected tropical diseases 13 (8), e0007211, 2019 | 61 | 2019 |
| Refining the weighted stochastic simulation algorithm DT Gillespie, M Roh, LR Petzold The Journal of chemical physics 130 (17), 174103, 2009 | 59 | 2009 |
| State-dependent doubly weighted stochastic simulation algorithm for automatic characterization of stochastic biochemical rare events MK Roh, BJ Daigle Jr, DT Gillespie, LR Petzold The Journal of chemical physics 135 (23), 234108, 2011 | 33 | 2011 |
| State-dependent biasing method for importance sampling in the weighted stochastic simulation algorithm MK Roh, DT Gillespie, LR Petzold The Journal of chemical physics 133 (17), 174106, 2010 | 27 | 2010 |
| Data-driven method for efficient characterization of rare event probabilities in biochemical systems MK Roh Bulletin of mathematical biology 81, 3097-3120, 2019 | 6 | 2019 |
| Compartmental Modeling Software: a fast, discrete stochastic framework for biochemical and epidemiological simulation CW Lorton, JL Proctor, MK Roh, PA Welkhoff Computational Methods in Systems Biology: 17th International Conference …, 2019 | 5 | 2019 |
| Stochastic parameter search for events MK Roh, P Eckhoff BMC systems biology 8 (1), 1-17, 2014 | 3 | 2014 |
| Data-driven initialization of SParSE MK Roh, JL Proctor AIP Conference Proceedings 1863 (1), 500003, 2017 | | 2017 |
| SParSE++: improved event-based stochastic parameter search MK Roh, BJ Daigle BMC Systems Biology 10 (1), 1-15, 2016 | | 2016 |
| Accurate characterization of stochastic rare events in biochemical systems MK Roh University of California at Santa Barbara, 2011 | | 2011 |
| StochKit2: Efficient and extensible software for stochastic simulation of biochemical systems KR Sanft, S Wu, H Li, J Fu, M Roh, LR Petzold | | |
| Automatic optimization of importance sampling parameters in weighted stochastic simulation algorithm MK Roh, B Daigle Jr, DT Gillespie, LR Petzold | | |
| Accelerated Maximum Likelihood Estimation for Stochastic Biochemical Systems BJ Daigle Jr, MK Roh, M Wheeler, LR Petzold, J Niemi | | |
| Algorithms and Software for Discrete Stochastic Simulation of Biochemical Systems MK Roh, K Sanft, S Wu, J Fu, B Drawert, M Lawson, A Hellander, ... | | |
Linda PetzoldProfessor, University of California Santa BarbaraVerified email at cs.ucsb.edu
