| Evolution of genes and genomes on the Drosophila phylogeny AG Clark, MB Eisen, DR Smith, CM Bergman, B Oliver, TA Markow, ... Nature 450 (7167), 203-18, 2007 | 2245 | 2007 |
| A comparative encyclopedia of DNA elements in the mouse genome F Yue, Y Cheng, A Breschi, J Vierstra, W Wu, T Ryba, R Sandstrom, Z Ma, ... Nature 515 (7527), 355-364, 2014 | 1930 | 2014 |
| A high-resolution map of human evolutionary constraint using 29 mammals K Lindblad-Toh, M Garber, O Zuk, MF Lin, BJ Parker, S Washietl, ... Nature 478 (7370), 476-482, 2011 | 1277 | 2011 |
| Evolution of pathogenicity and sexual reproduction in eight Candida genomes G Butler, MD Rasmussen, MF Lin, MAS Santos, S Sakthikumar, CA Munro, ... Nature 459 (7247), 657-662, 2009 | 1200 | 2009 |
| Rising rural body-mass index is the main driver of the global obesity epidemic in adults Nature 569 (7755), 260-264, 2019 | 750 | 2019 |
| Discovery of functional elements in 12 Drosophila genomes using evolutionary signatures A Stark, MF Lin, P Kheradpour, JS Pedersen, L Parts, JW Carlson, ... Nature 450 (7167), 219-232, 2007 | 717 | 2007 |
| Genome-wide inference of ancestral recombination graphs MD Rasmussen, MJ Hubisz, I Gronau, A Siepel PLoS genetics 10 (5), e1004342, 2014 | 351 | 2014 |
| Unified modeling of gene duplication, loss, and coalescence using a locus tree MD Rasmussen, M Kellis Genome research 22 (4), 755-765, 2012 | 189 | 2012 |
| Phylogenetic Identification and Functional Characterization of Orthologs and Paralogs across Human, Mouse, Fly, and Worm. bioRxiv. 2014 YC Wu, MS Bansal, MD Rasmussen Publisher Full Text, 0 | 184 | |
| Aspergillus infection in lung transplant patients: incidence and prognosis M Iversen, CM Burton, S Vand, L Skovfoged, J Carlsen, N Milman, ... European Journal of Clinical Microbiology & Infectious Diseases 26, 879-886, 2007 | 156 | 2007 |
| A Bayesian approach for fast and accurate gene tree reconstruction MD Rasmussen, M Kellis Molecular Biology and Evolution 28 (1), 273-290, 2011 | 139 | 2011 |
| Effects of triptorelin versus placebo on the symptoms of endometriosis MD Agneta Bergqvist, MD Thorbjörn Bergh, L Hogström, S Mattsson, ... Fertility and sterility 69 (4), 702-708, 1998 | 135 | 1998 |
| gCLUTO--An interactive clustering, visualization, and analysis system M Rasmussen, G Karypis | 133 | 2004 |
| TreeFix: statistically informed gene tree error correction using species trees YC Wu, MD Rasmussen, MS Bansal, M Kellis Systematic biology 62 (1), 110-120, 2013 | 126 | 2013 |
| Accurate gene-tree reconstruction by learning gene-and species-specific substitution rates across multiple complete genomes MD Rasmussen, M Kellis Genome research 17 (12), 1932-1942, 2007 | 108 | 2007 |
| Most parsimonious reconciliation in the presence of gene duplication, loss, and deep coalescence using labeled coalescent trees YC Wu, MD Rasmussen, MS Bansal, M Kellis Genome research 24 (3), 475-486, 2014 | 78 | 2014 |
| Performance and Scalability of Discriminative Metrics for Comparative Gene Identification in 12 Drosophila Genomes MF Lin, AN Deoras, MD Rasmussen, M Kellis PLoS computational biology 4 (4), e1000067, 2008 | 63 | 2008 |
| Ancestor-to-ancestor relationship linking methods and systems M Rasmussen, H Madsen, G Mangum US Patent 8,786,603, 2014 | 60 | 2014 |
| Evolution at the Subgene Level: Domain Rearrangements in the Drosophila Phylogeny YC Wu, MD Rasmussen, M Kellis Molecular biology and evolution 29 (2), 689-705, 2012 | 55 | 2012 |
| Replacing and Additive Horizontal Gene Transfer in Streptococcus SC Choi, MD Rasmussen, MJ Hubisz, I Gronau, MJ Stanhope, A Siepel Molecular biology and evolution 29 (11), 3309-3320, 2012 | 47 | 2012 |
Manolis KellisProfessor of Computer Science, MIT and Broad InstituteVerified email at mit.edu
