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John Abel
John Abel
Department of Machine Learning, PathAI
Verified email at mit.edu
Title
Cited by
Cited by
Year
Entrainment of circadian rhythms depends on firing rates and neuropeptide release of VIP SCN neurons
C Mazuski, JH Abel, SP Chen, TO Hermanstyne, JR Jones, T Simon, ...
Neuron 99 (3), 555-563. e5, 2018
822018
Functional network inference of the suprachiasmatic nucleus
JH Abel, K Meeker, D Granados-Fuentes, PC St. John, TJ Wang, ...
Proceedings of the National Academy of Sciences 113 (16), 4512-4517, 2016
652016
Ontogeny of circadian rhythms and synchrony in the suprachiasmatic nucleus
V Carmona-Alcocer, JH Abel, TC Sun, LR Petzold, FJ Doyle, CL Simms, ...
Journal of Neuroscience 38 (6), 1326-1334, 2018
552018
The malaria parasite has an intrinsic clock
F Rijo-Ferreira, VA Acosta-Rodriguez, JH Abel, I Kornblum, I Bento, ...
Science 368 (6492), 746-753, 2020
542020
Dual-Color Single-Cell Imaging of the Suprachiasmatic Nucleus Reveals a Circadian Role in Network Synchrony
Y Shan, JH Abel, Y Li, M Izumo, KH Cox, B Jeong, SH Yoo, DP Olson, ...
Neuron 108 (1), 164-179.e7, 2020
472020
GillesPy: a python package for stochastic model building and simulation
JH Abel, B Drawert, A Hellander, LR Petzold
IEEE life sciences letters 2 (3), 35-38, 2017
462017
Quantitative biology: theory, computational methods, and models
B Munsky, WS Hlavacek, LS Tsimring
MIT Press, 2018
322018
Clinical/Biomarker Data for Neoadjuvant Atezolizumab in Resectable Stage IB-IIIB NSCLC: Primary Analysis in the LCMC3 Study
D Carbone, J Lee, M Kris, I Wistuba, D Kwiatkowski, D Owen, P Bunn, ...
Journal of Thoracic Oncology 16 (3), S115-S116, 2021
302021
Etiology of burst suppression EEG patterns
A Shanker, JH Abel, G Schamberg, EN Brown
Frontiers in Psychology 12, 673529, 2021
212021
Porosity-Tuned Chitosan–Polyacrylamide Hydrogel Microspheres for Improved Protein Conjugation
S Jung, JH Abel, JL Starger, H Yi
Biomacromolecules 17 (7), 2427-2436, 2016
212016
A systems theoretic approach to analysis and control of mammalian circadian dynamics
JH Abel, FJ Doyle III
Chemical Engineering Research and Design 116, 48-60, 2016
202016
Shape-encoded chitosan–polyacrylamide hybrid hydrogel microparticles with controlled macroporous structures via replica molding for programmable biomacromolecular conjugation
E Kang, S Jung, JH Abel, A Pine, H Yi
Langmuir 32 (21), 5394-5402, 2016
172016
Pharmaceutical-based entrainment of circadian phase via nonlinear model predictive control
JH Abel, A Chakrabarty, EB Klerman, FJ Doyle III
Automatica 100, 336-348, 2019
162019
Amplitude metrics for cellular circadian bioluminescence reporters
PCS John, SR Taylor, JH Abel, FJ Doyle
Biophysical Journal 107 (11), 2712-2722, 2014
152014
Machine learning of EEG spectra classifies unconsciousness during GABAergic anesthesia
JH Abel, MA Badgeley, B Meschede-Krasa, G Schamberg, IC Garwood, ...
Plos one 16 (5), e0246165, 2021
142021
Controlling biological time: Nonlinear model predictive control for populations of circadian oscillators
JH Abel, A Chakrabarty, FJ Doyle
Emerging Applications of Control and Systems Theory: A Festschrift in Honor …, 2018
112018
Implantable brain–computer interface for neuroprosthetic-enabled volitional hand grasp restoration in spinal cord injury
I Cajigas, KC Davis, B Meschede-Krasa, NW Prins, S Gallo, JA Naeem, ...
Brain communications 3 (4), fcab248, 2021
92021
Recent advances in modeling sleep: from the clinic to society and disease
JH Abel, K Lecamwasam, MA St Hilaire, EB Klerman
Current opinion in physiology 15, 37-46, 2020
92020
A Coupled Stochastic Model Explains Differences in Cry Knockout Behavior
JH Abel, LA Widmer, PCS John, J Stelling, FJ Doyle
IEEE life sciences letters 1 (1), 3-6, 2015
92015
Artificial intelligence (AI)–powered pathologic response (PathR) assessment of resection specimens after neoadjuvant atezolizumab in patients with non-small cell lung cancer …
S Dacic, WD Travis, JM Giltnane, J Abel, F Kos, S Hilz, S Hennek, ...
Journal of Clinical Oncology 39 (15_suppl), 106-106, 2021
72021
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Articles 1–20