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Bernie J. Daigle, Jr.
Bernie J. Daigle, Jr.
Associate Professor of Biological Sciences and Computer Science at The University of Memphis
Verified email at memphis.edu - Homepage
Title
Cited by
Cited by
Year
Mucosal biofilm formation on middle-ear mucosa in the chinchilla model of otitis media
GD Ehrlich, R Veeh, X Wang, JW Costerton, JD Hayes, FZ Hu, BJ Daigle, ...
Jama 287 (13), 1710-1715, 2002
4692002
Independent component analysis: mining microarray data for fundamental human gene expression modules
JM Engreitz, BJ Daigle Jr, JJ Marshall, RB Altman
Journal of biomedical informatics 43 (6), 932-944, 2010
1302010
Accelerated maximum likelihood parameter estimation for stochastic biochemical systems
BJ Daigle, MK Roh, LR Petzold, J Niemi
BMC bioinformatics 13 (1), 1-18, 2012
662012
Stochastic simulation service: bridging the gap between the computational expert and the biologist
B Drawert, A Hellander, B Bales, D Banerjee, G Bellesia, BJ Daigle Jr, ...
PLoS computational biology 12 (12), e1005220, 2016
652016
Multi-omic biomarker identification and validation for diagnosing warzone-related post-traumatic stress disorder
KR Dean, R Hammamieh, SH Mellon, D Abu-Amara, JD Flory, G Guffanti, ...
Molecular psychiatry 25 (12), 3337-3349, 2020
632020
Automated estimation of rare event probabilities in biochemical systems
BJ Daigle Jr, MK Roh, DT Gillespie, LR Petzold
The Journal of chemical physics 134 (4), 01B628, 2011
622011
Whole-genome DNA methylation status associated with clinical PTSD measures of OIF/OEF veterans
R Hammamieh, N Chakraborty, A Gautam, S Muhie, R Yang, D Donohue, ...
Translational psychiatry 7 (7), e1169-e1169, 2017
522017
Core module biomarker identification with network exploration for breast cancer metastasis
R Yang, BJ Daigle, LR Petzold, FJ Doyle
BMC bioinformatics 13 (1), 1-11, 2012
502012
Inferring single-cell gene expression mechanisms using stochastic simulation
BJ Daigle Jr, M Soltani, LR Petzold, A Singh
Bioinformatics 31 (9), 1428-1435, 2015
402015
State-dependent doubly weighted stochastic simulation algorithm for automatic characterization of stochastic biochemical rare events
MK Roh, BJ Daigle Jr, DT Gillespie, LR Petzold
The Journal of chemical physics 135 (23), 234108, 2011
332011
Systems biology approach to understanding post-traumatic stress disorder
GS Thakur, BJ Daigle Jr, KR Dean, Y Zhang, M Rodriguez-Fernandez, ...
Molecular BioSystems 11 (4), 980-993, 2015
312015
Core modular blood and brain biomarkers in social defeat mouse model for post traumatic stress disorder
R Yang, BJ Daigle Jr, SY Muhie, R Hammamieh, M Jett, L Petzold, ...
BMC systems biology 7 (1), 1-12, 2013
272013
Mice lacking the β2 adrenergic receptor have a unique genetic profile before and after focal brain ischaemia
RE White, C Palm, L Xu, E Ling, M Ginsburg, JD Bernie Jr, R Han, ...
ASN neuro 4 (5), AN20110020, 2012
272012
Prognostic analysis of histopathological images using pre-trained convolutional neural networks: application to hepatocellular carcinoma
L Lu, BJ Daigle Jr
PeerJ 8, e8668, 2020
212020
M-BISON: microarray-based integration of data sources using networks
BJ Daigle, RB Altman
BMC bioinformatics 9 (1), 1-17, 2008
152008
Epigenetic biotypes of post-traumatic stress disorder in war-zone exposed veteran and active duty males
R Yang, A Gautam, D Getnet, BJ Daigle, S Miller, B Misganaw, KR Dean, ...
Molecular psychiatry 26 (8), 4300-4314, 2021
142021
Using pre-existing microarray datasets to increase experimental power: application to insulin resistance
BJ Daigle Jr, A Deng, T McLaughlin, SW Cushman, MC Cam, G Reaven, ...
PLoS computational biology 6 (3), e1000718, 2010
142010
Utilization of machine learning for identifying symptom severity military-related PTSD subtypes and their biological correlates
CE Siegel, EM Laska, Z Lin, M Xu, D Abu-Amara, MK Jeffers, M Qian, ...
Translational psychiatry 11 (1), 227, 2021
112021
Identification of disease states associated with coagulopathy in trauma
Y Zhang, TB Wu, BJ Daigle, M Cohen, L Petzold
BMC medical informatics and decision making 16 (1), 1-9, 2016
102016
Current progress in static and dynamic modeling of biological networks
BJ Daigle, BS Srinivasan, JA Flannick, AF Novak, S Batzoglou
Systems Biology for Signaling Networks, 13-73, 2010
92010
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Articles 1–20