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Amatur Rahman
Amatur Rahman
Postdoctoral Scholar, Department of Biology, The Pennsylvania State University
Verified email at psu.edu - Homepage
Title
Cited by
Cited by
Year
Representation of k-Mer Sets Using Spectrum-Preserving String Sets
A Rahman, P Medevedev
Journal of Computational Biology 28 (4), 381-394, 2021
602021
Disk compression of k-mer sets
A Rahman, R Chikhi, P Medvedev
Algorithms for Molecular Biology 16 (1), 10, 2021
242021
An adaptive IoT platform on budgeted 3G data plans
M Rahman, A Rahman, HJ Hong, LW Pan, MYS Uddin, ...
Journal of Systems Architecture 97, 65-76, 2019
232019
The K-mer File Format: a standardized and compact disk representation of sets of k-mers
Y Dufresne, T Lemane, P Marijon, P Peterlongo, A Rahman, M Kokot, ...
Bioinformatics 38 (18), 4423-4425, 2022
122022
Assembler artifacts include misassembly because of unsafe unitigs and underassembly because of bidirected graphs
A Rahman, P Medvedev
Genome Research 32 (9), 1746-1753, 2022
112022
Adaptive sensing using internet-of-things with constrained communications
M Rahman, HJ Hong, A Rahman, PH Tsai, A Afrin, MYS Uddin, ...
Proceedings of the 16th Workshop on Adaptive and Reflective Middleware, 1-6, 2017
62017
AQBox: An air quality measuring box from COTS gas sensors
MR Hera, A Rahman, A Afrin, MYS Uddin, N Venkatasubramanian
2017 International Conference on Networking, Systems and Security (NSysS …, 2017
42017
Compression algorithm for colored de Bruijn graphs
A Rahman, Y Dufresne, P Medvedev
bioRxiv, 2023.05. 12.540616, 2023
32023
Compression Algorithms for De Bruijn Graph and Hidden Assembly Artifacts
A Rahman
The Pennsylvania State University, 2023
12023
Uncovering hidden assembly artifacts: when unitigs are not safe and bidirected graphs are not helpful
A Rahman, P Medvedev
International Conference on Research in Computational Molecular Biology, 377-379, 2022
12022
kRISP-meR: A Reference-free Guide-RNA Design Tool for CRISPR/Cas9
MR Hera, A Rahman, A Rahman
bioRxiv, 869115, 2019
12019
GPU-accelerated and pipelined methylation calling
Y Feng, G Gudukbay Akbulut, X Tang, JR Gunasekaran, A Rahman, ...
Bioinformatics Advances 2 (1), vbac088, 2022
2022
Representation of k-mer sets using spectrum-preserving string sets. bioRxiv, page 2020.01. 07.896928
A Rahman, P Medvedev
January, 2020
2020
CANDIDATES’DECLARATION
MR Hera, A Rahman, A Afrin
2017
Identification of Causative Agent for Fungal Infection and Effect of Disinfectants on Hatching and Survival Rate of Bata (Labeo. Bata) Larvae. Adv Plants Agric Res 7 (4): 00264 …
AMD Rahman
Saprolegnia, 2017
2017
Adaptive sensing using internet-of-things with constrained communications.
MR Hera, HJ Hong, A Rahman, PH Tsai, A Afrin, MYS Uddin, ...
ARM@ Middleware, 6:1-6:6, 2017
2017
GPU-accelerated and pipelined methylation calling
Y Feng, GG Akbulut, X Tang, JR Gunasekaran, A Rahman, P Medvedev, ...
Publications scientifiques de l'Institut de Recherche en Informatique et Systèmes Aléatoires (IRISA)
Y Dufresne, T Lemane, P Marijon, P Peterlongo, A Rahman
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Articles 1–18