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William Greenleaf
William Greenleaf
Associate Professor of Genetics, Stanford University
Verified email at stanford.edu - Homepage
Title
Cited by
Cited by
Year
Transposition of native chromatin for fast and sensitive epigenomic profiling of open chromatin, DNA-binding proteins and nucleosome position
JD Buenrostro, PG Giresi, LC Zaba, HY Chang, WJ Greenleaf
Nature methods 10 (12), 1213-1218, 2013
59932013
ATAC‐seq: a method for assaying chromatin accessibility genome‐wide
JD Buenrostro, B Wu, HY Chang, WJ Greenleaf
Current protocols in molecular biology 109 (1), 21.29. 1-21.29. 9, 2015
32042015
Single-cell chromatin accessibility reveals principles of regulatory variation
JD Buenrostro, B Wu, UM Litzenburger, D Ruff, ML Gonzales, MP Snyder, ...
Nature 523 (7561), 486-490, 2015
20862015
An improved ATAC-seq protocol reduces background and enables interrogation of frozen tissues
MR Corces, AE Trevino, EG Hamilton, PG Greenside, ...
Nature methods 14 (10), 959-962, 2017
18842017
Chromatin accessibility and the regulatory epigenome
SL Klemm, Z Shipony, WJ Greenleaf
Nature Reviews Genetics 20 (4), 207-220, 2019
13932019
chromVAR: inferring transcription-factor-associated accessibility from single-cell epigenomic data
AN Schep, B Wu, JD Buenrostro, WJ Greenleaf
Nature methods 14 (10), 975-978, 2017
11122017
Lineage-specific and single-cell chromatin accessibility charts human hematopoiesis and leukemia evolution
MR Corces, JD Buenrostro, B Wu, PG Greenside, SM Chan, JL Koenig, ...
Nature genetics 48 (10), 1193-1203, 2016
10912016
Direct observation of base-pair stepping by RNA polymerase
EA Abbondanzieri, WJ Greenleaf, JW Shaevitz, R Landick, SM Block
Nature 438 (7067), 460-465, 2005
10552005
HiChIP: efficient and sensitive analysis of protein-directed genome architecture
MR Mumbach, AJ Rubin, RA Flynn, C Dai, PA Khavari, WJ Greenleaf, ...
Nature methods 13 (11), 919-922, 2016
9982016
The chromatin accessibility landscape of primary human cancers
MR Corces, JM Granja, S Shams, BH Louie, JA Seoane, W Zhou, ...
Science 362 (6413), eaav1898, 2018
9852018
ArchR is a scalable software package for integrative single-cell chromatin accessibility analysis
JM Granja, MR Corces, SE Pierce, ST Bagdatli, H Choudhry, HY Chang, ...
Nature genetics 53 (3), 403-411, 2021
7482021
Massively parallel single-cell chromatin landscapes of human immune cell development and intratumoral T cell exhaustion
AT Satpathy, JM Granja, KE Yost, Y Qi, F Meschi, GP McDermott, ...
Nature biotechnology 37 (8), 925-936, 2019
7032019
Integrated single-cell analysis maps the continuous regulatory landscape of human hematopoietic differentiation
JD Buenrostro, MR Corces, CA Lareau, B Wu, AN Schep, MJ Aryee, ...
Cell 173 (6), 1535-1548. e16, 2018
6372018
High-resolution, single-molecule measurements of biomolecular motion
WJ Greenleaf, MT Woodside, SM Block
Annu. Rev. Biophys. Biomol. Struct. 36 (1), 171-190, 2007
6192007
Origin and differentiation of human memory CD8 T cells after vaccination
RS Akondy, M Fitch, S Edupuganti, S Yang, HT Kissick, KW Li, ...
Nature 552 (7685), 362-367, 2017
5122017
Artificial cavitation nuclei significantly enhance acoustically induced cell transfection
WJ Greenleaf, ME Bolander, G Sarkar, MB Goldring, JF Greenleaf
Ultrasound in medicine & biology 24 (4), 587-595, 1998
4871998
Enhancer connectome in primary human cells identifies target genes of disease-associated DNA elements
MR Mumbach, AT Satpathy, EA Boyle, C Dai, BG Gowen, SW Cho, ...
Nature genetics 49 (11), 1602-1612, 2017
4642017
Direct observation of hierarchical folding in single riboswitch aptamers
WJ Greenleaf, KL Frieda, DAN Foster, MT Woodside, SM Block
Science 319 (5863), 630-633, 2008
4642008
The human tumor atlas network: charting tumor transitions across space and time at single-cell resolution
O Rozenblatt-Rosen, A Regev, P Oberdoerffer, T Nawy, A Hupalowska, ...
Cell 181 (2), 236-249, 2020
3982020
The human body at cellular resolution: the NIH Human Biomolecular Atlas Program
Caltech-UW TMC Cai Long lcai@ caltech. edu 21 b Shendure Jay 9 Trapnell Cole ...
Nature 574 (7777), 187-192, 2019
3942019
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