ELM—the database of eukaryotic linear motifs H Dinkel, S Michael, RJ Weatheritt, NE Davey, K Van Roey, B Altenberg, ... Nucleic acids research 40 (D1), D242-D251, 2012 | 373 | 2012 |
SLiMFinder: a probabilistic method for identifying over-represented, convergently evolved, short linear motifs in proteins RJ Edwards, NE Davey, DC Shields PloS one 2 (10), e967, 2007 | 194 | 2007 |
Biochar alters the soil microbiome and soil function: results of next‐generation amplicon sequencing across Europe JR Jenkins, M Viger, EC Arnold, ZM Harris, M Ventura, F Miglietta, ... Gcb Bioenergy 9 (3), 591-612, 2017 | 161 | 2017 |
SLiMDisc: short, linear motif discovery, correcting for common evolutionary descent NE Davey, DC Shields, RJ Edwards Nucleic acids research 34 (12), 3546-3554, 2006 | 118 | 2006 |
SLiMPrints: conservation-based discovery of functional motif fingerprints in intrinsically disordered protein regions NE Davey, JL Cowan, DC Shields, TJ Gibson, MJ Coldwell, RJ Edwards Nucleic acids research 40 (21), 10628-10641, 2012 | 100 | 2012 |
Bioinformatic discovery of novel bioactive peptides RJ Edwards, N Moran, M Devocelle, A Kiernan, G Meade, W Signac, ... Nature chemical biology 3 (2), 108-112, 2007 | 98 | 2007 |
SLiMSearch 2.0: biological context for short linear motifs in proteins NE Davey, NJ Haslam, DC Shields, RJ Edwards Nucleic acids research 39 (suppl_2), W56-W60, 2011 | 92 | 2011 |
SLiMFinder: a web server to find novel, significantly over-represented, short protein motifs NE Davey, NJ Haslam, DC Shields, RJ Edwards Nucleic acids research 38 (suppl_2), W534-W539, 2010 | 79 | 2010 |
Masking residues using context-specific evolutionary conservation significantly improves short linear motif discovery NE Davey, DC Shields, RJ Edwards Bioinformatics 25 (4), 443-450, 2009 | 79 | 2009 |
Draft genome assembly of the invasive cane toad, Rhinella marina RJ Edwards, DE Tuipulotu, TG Amos, D O'Meally, MF Richardson, ... Gigascience 7 (9), giy095, 2018 | 77 | 2018 |
Tandem repeat copy-number variation in protein-coding regions of human genes CT O'Dushlaine, RJ Edwards, SD Park, DC Shields Genome biology 6, 1-12, 2005 | 75 | 2005 |
The SLiMDisc server: short, linear motif discovery in proteins NE Davey, RJ Edwards, DC Shields Nucleic acids research 35 (suppl_2), W455-W459, 2007 | 71 | 2007 |
Fluorescent protein‐mediated colour polymorphism in reef corals: multicopy genes extend the adaptation/acclimatization potential to variable light environments JR Gittins, C D'Angelo, F Oswald, RJ Edwards, J Wiedenmann Molecular ecology 24 (2), 453-465, 2015 | 67 | 2015 |
Responses of the Emiliania huxleyi proteome to ocean acidification BM Jones, MD Iglesias-Rodriguez, PJ Skipp, RJ Edwards, MJ Greaves, ... PloS one 8 (4), e61868, 2013 | 66 | 2013 |
Monitoring modulators of platelet aggregation in a microtiter plate assay N Moran, A Kiernan, E Dunne, RJ Edwards, DC Shields, D Kenny Analytical biochemistry 357 (1), 77-84, 2006 | 66 | 2006 |
CompariMotif: quick and easy comparisons of sequence motifs RJ Edwards, NE Davey, DC Shields Bioinformatics 24 (10), 1307-1309, 2008 | 63 | 2008 |
Computational prediction of short linear motifs from protein sequences RJ Edwards, N Palopoli Computational Peptidology, 89-141, 2015 | 62 | 2015 |
Quantitative Proteomics of the Infectious and Replicative Forms of Chlamydia trachomatis PJS Skipp, C Hughes, T McKenna, R Edwards, J Langridge, NR Thomson, ... PLoS One 11 (2), e0149011, 2016 | 60 | 2016 |
GASP: gapped ancestral sequence prediction for proteins RJ Edwards, DC Shields BMC bioinformatics 5, 1-10, 2004 | 58 | 2004 |
Correlation of probiotic Lactobacillus salivarius growth phase with its cell wall-associated proteome P Kelly, PB Maguire, M Bennett, DJ Fitzgerald, RJ Edwards, B Thiede, ... FEMS Microbiology Letters 252 (1), 153-159, 2005 | 57 | 2005 |