| Geospatial immune variability illuminates differential evolution of lung adenocarcinoma K AbdulJabbar, SEA Raza, R Rosenthal, M Jamal-Hanjani, S Veeriah, ... Nature medicine 26 (7), 1054-1062, 2020 | 247 | 2020 |
| The genomic landscape of meiotic crossovers and gene conversions in Arabidopsis thaliana E Wijnker, G Velikkakam James, J Ding, F Becker, JR Klasen, V Rawat, ... Elife 2, e01426, 2013 | 234 | 2013 |
| Chromosome-level assembly of Arabidopsis thaliana Ler reveals the extent of translocation and inversion polymorphisms L Zapata, J Ding, EM Willing, B Hartwig, D Bezdan, WB Jiao, V Patel, ... Proceedings of the National Academy of Sciences 113 (28), E4052-E4060, 2016 | 210 | 2016 |
| Subclonal reconstruction of tumors by using machine learning and population genetics G Caravagna, T Heide, MJ Williams, L Zapata, D Nichol, K Chkhaidze, ... Nature genetics 52 (9), 898-907, 2020 | 110 | 2020 |
| Prediction of benefit from checkpoint inhibitors in mismatch repair deficient metastatic colorectal cancer: role of tumor infiltrating lymphocytes F Loupakis, I Depetris, P Biason, R Intini, AA Prete, F Leone, P Lombardi, ... The oncologist 25 (6), 481-487, 2020 | 106 | 2020 |
| Negative selection in tumor genome evolution acts on essential cellular functions and the immunopeptidome L Zapata, O Pich, L Serrano, FA Kondrashov, S Ossowski, MH Schaefer Genome biology 19, 1-17, 2018 | 106 | 2018 |
| Evolutionary dynamics of neoantigens in growing tumors E Lakatos, MJ Williams, RO Schenck, WCH Cross, J Househam, L Zapata, ... Nature genetics 52 (10), 1057-1066, 2020 | 102 | 2020 |
| Identification of gene mutations and fusion genes in patients with Sézary syndrome A Prasad, R Rabionet, B Espinet, L Zapata, A Puiggros, C Melero, A Puig, ... Journal of Investigative Dermatology 136 (7), 1490-1499, 2016 | 97 | 2016 |
| Phenotypic plasticity and genetic control in colorectal cancer evolution J Househam, T Heide, GD Cresswell, I Spiteri, C Kimberley, L Zapata, ... Nature 611 (7937), 744-753, 2022 | 96 | 2022 |
| Analysis of a long-term outbreak of XDR Pseudomonas aeruginosa: a molecular epidemiological study M Willmann, D Bezdan, L Zapata, H Susak, W Vogel, K Schröppel, J Liese, ... Journal of Antimicrobial Chemotherapy 70 (5), 1322-1330, 2015 | 70 | 2015 |
| The co-evolution of the genome and epigenome in colorectal cancer T Heide, J Househam, GD Cresswell, I Spiteri, C Lynn, M Mossner, ... Nature 611 (7937), 733-743, 2022 | 69 | 2022 |
| Sporadic and reversible chromothripsis in chronic lymphocytic leukemia revealed by longitudinal genomic analysis L Bassaganyas, S Beà, G Escaramis, C Tornador, I Salaverria, L Zapata, ... Leukemia 27 (12), 2376-2379, 2013 | 48 | 2013 |
| Mapping the breast cancer metastatic cascade onto ctDNA using genetic and epigenetic clonal tracking GD Cresswell, D Nichol, I Spiteri, H Tari, L Zapata, T Heide, CC Maley, ... Nature communications 11 (1), 1446, 2020 | 45 | 2020 |
| Immune selection determines tumor antigenicity and influences response to checkpoint inhibitors L Zapata, G Caravagna, MJ Williams, E Lakatos, K AbdulJabbar, ... Nature Genetics 55 (3), 451-460, 2023 | 39* | 2023 |
| Measuring the distribution of fitness effects in somatic evolution by combining clonal dynamics with dN/dS ratios MJ Williams, L Zapata, B Werner, CP Barnes, A Sottoriva, TA Graham Elife 9, e48714, 2020 | 39 | 2020 |
| Jitterbug: somatic and germline transposon insertion detection at single-nucleotide resolution E Hénaff, L Zapata, JM Casacuberta, S Ossowski BMC genomics 16, 1-16, 2015 | 39 | 2015 |
| SalmonDB: a bioinformatics resource for Salmo salar and Oncorhynchus mykiss A Di Genova, A Aravena, L Zapata, M Gonzalez, A Maass, P Iturra Database 2011, bar050, 2011 | 39 | 2011 |
| The rate and spectrum of mosaic mutations during embryogenesis revealed by RNA sequencing of 49 tissues F Muyas, L Zapata, R Guigó, S Ossowski Genome Medicine 12, 1-14, 2020 | 34 | 2020 |
| Nuclear gene proximity and protein interactions shape transcript covariations in mammalian single cells M Tarbier, SD Mackowiak, J Frade, S Catuara-Solarz, I Biryukova, ... Nature communications 11 (1), 5445, 2020 | 33 | 2020 |
| Allele balance bias identifies systematic genotyping errors and false disease associations F Muyas, M Bosio, A Puig, H Susak, L Domènech, G Escaramis, L Zapata, ... Human mutation 40 (1), 115-126, 2019 | 33 | 2019 |
Stephan OssowskiInstitute of Medical Genetics and Applied Genomics, University of Tübingen, Tübingen, GermanyVerified email at crg.eu
