Aaron Sim
Aaron Sim
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Cited by
Cited by
E7 (7) formulation of N= 2 backgrounds
M Grana, J Louis, A Sim, D Waldram
Journal of High Energy Physics 2009 (07), 104, 2009
Quantification of HTLV-1 clonality and TCR diversity
DJ Laydon, A Melamed, A Sim, NA Gillet, K Sim, S Darko, JS Kroll, ...
PLoS computational biology 10 (6), e1003646, 2014
Big data in drug discovery
N Brown, J Cambruzzi, PJ Cox, M Davies, J Dunbar, D Plumbley, ...
Progress in medicinal chemistry 57, 277-356, 2018
Systems analysis of the dynamic inflammatory response to tissue damage reveals spatiotemporal properties of the wound attractant gradient
H Weavers, J Liepe, A Sim, W Wood, P Martin, MPH Stumpf
Current Biology 26 (15), 1975-1989, 2016
Information theory and signal transduction systems: from molecular information processing to network inference
SS Mc Mahon, A Sim, S Filippi, R Johnson, J Liepe, D Smith, MPH Stumpf
Seminars in cell & developmental biology 35, 98-108, 2014
Interpretable graph convolutional neural networks for inference on noisy knowledge graphs
D Neil, J Briody, A Lacoste, A Sim, P Creed, A Saffari
arXiv preprint arXiv:1812.00279, 2018
Inference of random walk models to describe leukocyte migration
PJM Jones, A Sim, HB Taylor, L Bugeon, MJ Dallman, B Pereira, ...
Physical biology 12 (6), 066001, 2015
Great cities look small
A Sim, SN Yaliraki, M Barahona, MPH Stumpf
Journal of The Royal Society Interface 12 (109), 20150315, 2015
Nanog fluctuations in embryonic stem cells highlight the problem of measurement in cell biology
RCG Smith, PS Stumpf, SJ Ridden, A Sim, S Filippi, HA Harrington, ...
Biophysical journal 112 (12), 2641-2652, 2017
Single cell phenotyping reveals heterogeneity among hematopoietic stem cells following infection
AL MacLean, MA Smith, J Liepe, A Sim, R Khorshed, NM Rashidi, ...
Stem Cells 35 (11), 2292-2304, 2017
Directed graph embeddings in pseudo-riemannian manifolds
A Sim, ML Wiatrak, A Brayne, P Creed, S Paliwal
International Conference on Machine Learning, 9681-9690, 2021
Graph neutral networks with attention
P Creed, SIM Aaron, A Alamdari, J Briody, D Neil, A Lacoste
US Patent App. 17/041,625, 2021
Accurate reconstruction of cell and particle tracks from 3D live imaging data
J Liepe, A Sim, H Weavers, L Ward, P Martin, MPH Stumpf
Cell systems 3 (1), 102-107, 2016
Random forests on distance matrices for imaging genetics studies
A Sim, D Tsagkrasoulis, G Montana
Statistical applications in genetics and molecular biology 12 (6), 757-786, 2013
Attention filtering for multiple instance learning
P Creed, AJKJ Sim, ST Spencer, MJ Vilenius
US Patent App. 17/041,533, 2021
Contrastive mixture of posteriors for counterfactual inference, data integration and fairness
A Foster, ┴ VezÚr, CA Glastonbury, P Creed, S Abujudeh, A Sim
International Conference on Machine Learning, 6578-6621, 2022
Goldstein-Kac telegraph processes with random speeds: Path probabilities, likelihoods, and reported LÚvy flights
A Sim, J Liepe, MPH Stumpf
Physical Review E 91 (4), 042115, 2015
Information geometry and sequential Monte Carlo
A Sim, S Filippi, MPH Stumpf
arXiv preprint arXiv:1212.0764, 2012
Information geometry and sequential Monte Carlo samplers
A Sim, S Filippi, MPH Stumpf
arXiv preprint ArXiv:1212.0764, 2012
Proxy-based zero-shot entity linking by effective candidate retrieval
M Wiatrak, E Arvaniti, A Brayne, J Vetterle, A Sim
arXiv preprint arXiv:2301.13318, 2023
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Articles 1–20