Alan Walker
Alan Walker
Professor, Rowett Institute, University of Aberdeen
Verified email at - Homepage
Cited by
Cited by
Reagent and laboratory contamination can critically impact sequence-based microbiome analyses
SJ Salter, MJ Cox, EM Turek, ST Calus, WO Cookson, MF Moffatt, ...
BMC biology 12, 1-12, 2014
Dominant and diet-responsive groups of bacteria within the human colonic microbiota
AW Walker, J Ince, SH Duncan, LM Webster, G Holtrop, X Ze, D Brown, ...
The ISME journal 5 (2), 220-230, 2011
Shotgun metagenomics, from sampling to analysis
C Quince, AW Walker, JT Simpson, NJ Loman, N Segata
Nature Biotechnology 35 (12), 833–844, 2017
Salmonella enterica serovar typhimurium exploits inflammation to compete with the intestinal microbiota
B Stecher, R Robbiani, AW Walker, AM Westendorf, M Barthel, M Kremer, ...
PLoS biology 5 (10), e244, 2007
High-throughput clone library analysis of the mucosa-associated microbiota reveals dysbiosis and differences between inflamed and non-inflamed regions of the intestine in …
AW Walker, JD Sanderson, C Churcher, GC Parkes, BN Hudspith, ...
BMC microbiology 11, 1-12, 2011
pH and peptide supply can radically alter bacterial populations and short-chain fatty acid ratios within microbial communities from the human colon
AW Walker, SH Duncan, EC McWilliam Leitch, MW Child, HJ Flint
Applied and environmental microbiology 71 (7), 3692-3700, 2005
Sequencing ancient calcified dental plaque shows changes in oral microbiota with dietary shifts of the Neolithic and Industrial revolutions
CJ Adler, K Dobney, LS Weyrich, J Kaidonis, AW Walker, W Haak, ...
Nature genetics 45 (4), 450-455, 2013
Intestinal colonization resistance
TD Lawley, AW Walker
Immunology 138 (1), 1-11, 2013
Targeted Restoration of the Intestinal Microbiota with a Simple, Defined Bacteriotherapy Resolves Relapsing Clostridium difficile Disease in Mice
TD Lawley, S Clare, AW Walker, MD Stares, TR Connor, C Raisen, ...
PLoS pathogens 8 (10), e1002995, 2012
Gut inflammation can boost horizontal gene transfer between pathogenic and commensal Enterobacteriaceae
B Stecher, R Denzler, L Maier, F Bernet, MJ Sanders, DJ Pickard, ...
Proceedings of the National Academy of Sciences 109 (4), 1269-1274, 2012
Assembly of 913 microbial genomes from metagenomic sequencing of the cow rumen
R Stewart, MD Auffret, A Warr, AH Wiser, MO Press, KW Langford, ...
Nature communications 9, 870, 2018
The Intestinal Microbiota Contributes to the Ability of Helminths to Modulate Allergic Inflammation
MM Zaiss, A Rapin, L Lebon, LK Dubey, I Mosconi, K Sarter, A Piersigilli, ...
Immunity 43, 998-1010, 2015
Compendium of 4,941 rumen metagenome-assembled genomes for rumen microbiome biology and enzyme discovery
RD Stewart, MD Auffret, A Warr, AW Walker, R Roehe, M Watson
Nature biotechnology 37 (8), 953-961, 2019
Antibiotic Treatment of Clostridium difficile Carrier Mice Triggers a Supershedder State, Spore-Mediated Transmission, and Severe Disease in …
TD Lawley, S Clare, AW Walker, D Goulding, RA Stabler, N Croucher, ...
Infection and immunity 77 (9), 3661-3669, 2009
Modulation of the human gut microbiota by dietary fibres occurs at the species level
WSF Chung, AW Walker, P Louis, J Parkhill, J Vermeiren, D Bosscher, ...
BMC biology 14 (1), 3 (doi: 10.1186/s12915-015-0224-3), 2016
The transcription factor T-bet regulates intestinal inflammation mediated by interleukin-7 receptor+ innate lymphoid cells
N Powell, AW Walker, E Stolarczyk, JB Canavan, MR Gökmen, E Marks, ...
Immunity 37 (4), 674-684, 2012
The impact of different DNA extraction kits and laboratories upon the assessment of human gut microbiota composition by 16S rRNA gene sequencing
NA Kennedy, AW Walker, SH Berry, SH Duncan, FM Farquarson, P Louis, ...
PloS one 9 (2), e88982, 2014
Selective colonization of insoluble substrates by human faecal bacteria
ECMW Leitch, AW Walker, SH Duncan, G Holtrop, HJ Flint
Environmental microbiology 9 (3), 667-679, 2007
Phylogeny, culturing, and metagenomics of the human gut microbiota
AW Walker, SH Duncan, P Louis, HJ Flint
Trends in microbiology 22 (5), 267-274, 2014
16S rRNA gene-based profiling of the human infant gut microbiota is strongly influenced by sample processing and PCR primer choice
AW Walker, JC Martin, P Scott, J Parkhill, HJ Flint, KP Scott
Microbiome 3, 26, 2015
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