Joshua T. Vogelstein

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Carey E. PriebeProfessor of Applied Mathematics and Statistics, Johns Hopkins UniversityVerified email at jhu.edu
Randal BurnsProfessor of Computer Science, Johns Hopkins UniversityVerified email at cs.jhu.edu
William R. Gray-Roncal, Ph.D.Johns Hopkins University Applied Physics LaboratoryVerified email at jhu.edu
R. Jacob VogelsteinMind-X Corp, FlashX LLC, Camden Partners NexusVerified email at mind-x.io
Michael MilhamChild Mind Institute, Nathan Kline InstituteVerified email at childmind.org
Eric W BridgefordJohns Hopkins UniversityVerified email at jhu.edu
Youngser ParkResearch Scientist, Johns Hopkins UniversityVerified email at jhu.edu
Cencheng ShenUniversity of DelawareVerified email at udel.edu
Vince LyzinskiUniversity of MarylandVerified email at umd.edu
Michael PowellUnited States Military AcademyVerified email at westpoint.edu
Jeff Lichtmanprofessor of molecular and cellular biology, Harvard UniversityVerified email at mcb.harvard.edu
Daniel Lewis SussmanBoston UniversityVerified email at bu.edu
Ting Xu (徐婷)Research Scientist, Child Mind Institute, NYVerified email at childmind.org
Minh TangNorth Carolina State UniversityVerified email at ncsu.edu
Bert VogelsteinJohns HopkinsVerified email at jhmi.edu
Cameron CraddockThe Neuro BureauVerified email at meta.com
Brian CaffoProfessor of Biostatistics, Johns Hopkins UniversityVerified email at jhu.edu
Liam PaninskiColumbia UniversityVerified email at stat.columbia.edu
Narayanan 'Bobby' KasthuriUniversity of Chicago/Argonne National LaboratoryVerified email at uchicago.edu
Kenneth KinzlerJohns Hopkins UniversityVerified email at jhmi.edu

Joshua T. Vogelstein

Dept of Biomedical Engineering, Johns Hopkins University

Verified email at jhu.edu - Homepage

biomedical data science connectomics network science natural intelligence machine learning


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Detection and localization of surgically resectable cancers with a multi-analyte blood test JD Cohen, L Li, Y Wang, C Thoburn, B Afsari, L Danilova, C Douville, ... Science 359 (6378), 926-930, 2018	1976	2018
Saturated reconstruction of a volume of neocortex N Kasthuri, KJ Hayworth, DR Berger, RL Schalek, JA Conchello, ... Cell 162 (3), 648-661, 2015	926	2015
Fast non-negative deconvolution for spike train inference from population calcium imaging JT Vogelstein, AM Packer, TA Machado, T Sippy, B Babadi, R Yuste, ... Journal of Neurophysiology 104 (6), 3691-3704, 2010	489	2010
Differential connectivity and response dynamics of excitatory and inhibitory neurons in visual cortex SB Hofer, H Ko, B Pichler, J Vogelstein, H Ros, H Zeng, E Lein, NA Lesica, ... Nature neuroscience 14 (8), 1045-1052, 2011	483	2011
Imaging human connectomes at the macroscale RC Craddock, S Jbabdi, CG Yan, JT Vogelstein, FX Castellanos, ... Nature methods 10 (6), 524-539, 2013	455	2013
Spike inference from calcium imaging using sequential Monte Carlo methods JT Vogelstein, BO Watson, AM Packer, R Yuste, B Jedynak, L Paninski Biophysical journal 97 (2), 636-655, 2009	298	2009
Whole-brain serial-section electron microscopy in larval zebrafish DGC Hildebrand, M Cicconet, RM Torres, W Choi, TM Quan, J Moon, ... Nature 545 (7654), 345-349, 2017	286	2017
Dynamically reconfigurable silicon array of spiking neurons with conductance-based synapses RJ Vogelstein, U Mallik, JT Vogelstein, G Cauwenberghs IEEE transactions on neural networks 18 (1), 253-265, 2007	276	2007
DeltaCon: A Principled Massive-Graph Similarity Function D Koutra, JT Vogelstein, C Faloutsos Proceedings of the 2013 SIAM International Conference on Data Mining, 2013	272	2013
Discovery of Brainwide Neural-Behavioral Maps via Multiscale Unsupervised Structure Learning. JT Vogelstein, Y Park, T Ohyama, R Kerr, JW Truman, CE Priebe, M Zlatic Science, 2014	271	2014
FlashGraph: processing billion-node graphs on an array of commodity SSDs DM Da Zheng, R Burns, J Vogelstein, CE Priebe, AS Szalay File and Storage Technologies (FAST15), 2015	262	2015
A new look at state-space models for neural data L Paninski, Y Ahmadian, DG Ferreira, S Koyama, K Rahnama Rad, ... Journal of computational neuroscience 29, 107-126, 2010	242	2010
The predictive capacity of personal genome sequencing NJ Roberts, JT Vogelstein, G Parmigiani, KW Kinzler, B Vogelstein, ... Science translational medicine 4 (133), 133ra58-133ra58, 2012	233	2012
Loss of FHIT expression in cervical carcinoma cell lines and primary tumors DL Greenspan, DC Connolly, R Wu, RY Lei, JTC Vogelstein, YT Kim, ... Cancer research 57 (21), 4692, 1997	224	1997
Towards automated analysis of connectomes: The configurable pipeline for the analysis of connectomes (c-pac) C Craddock, S Sikka, B Cheung, R Khanuja, SS Ghosh, C Yan, Q Li, ... Front Neuroinform 42, 10-3389, 2013	210	2013
Statistical inference on random dot product graphs: a survey A Athreya, DE Fishkind, M Tang, CE Priebe, Y Park, JT Vogelstein, ... The Journal of Machine Learning Research 18 (1), 8393-8484, 2017	203	2017
Fast Approximate Quadratic Programming for Graph Matching JT Vogelstein, JM Conroy, LJ Podrazik, SG Kratzer, DE Fishkind, ... PLoS One 10 (4), 2015	193*	2015
Different scaling of linear models and deep learning in UKBiobank brain images versus machine-learning datasets MA Schulz, BTT Yeo, JT Vogelstein, J Mourao-Miranada, JN Kather, ... Nature communications 11 (1), 4238, 2020	166*	2020
Covariate-assisted spectral clustering N Binkiewicz, JT Vogelstein, K Rohe Biometrika 104 (2), 361-377, 2017	163	2017
Graph matching: relax at your own risk V Lyzinski, D Fishkind, M Fiori, J Vogelstein, C Priebe, G Sapiro IEEE Pattern Analysis and Machine Intelligence, 2015	156	2015

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