Helene Touzet
Helene Touzet
CNRS, Lille (France)
Verified email at - Homepage
Cited by
Cited by
SortMeRNA: fast and accurate filtering of ribosomal RNAs in metatranscriptomic data
E Kopylova, L Noé, H Touzet
Bioinformatics 28 (24), 3211-3217, 2012
Efficient and accurate P-value computation for Position Weight Matrices
H Touzet, JS Varré
Algorithms for Molecular Biology 2, 1-12, 2007
Algorithms with polynomial interpretation termination proof
G Bonfante, A Cichon, JY Marion, H Touzet
Journal of Functional Programming 11 (1), 33-53, 2001
CARNAC: folding families of related RNAs
H Touzet, O Perriquet
Nucleic acids research 32 (suppl_2), W142-W145, 2004
Assessment of common and emerging bioinformatics pipelines for targeted metagenomics
L Siegwald, H Touzet, Y Lemoine, D Hot, C Audebert, S Caboche
PLoS One 12 (1), e0169563, 2017
Analysis of tree edit distance algorithms
S Dulucq, H Touzet
Combinatorial Pattern Matching, 83-95, 2003
Finding the common structure shared by two homologous RNAs
O Perriquet, H Touzet, M Dauchet
Bioinformatics 19 (1), 108-116, 2003
Predicting transcription factor binding sites using local over-representation and comparative genomics
M Defrance, H Touzet
BMC bioinformatics 7, 1-11, 2006
Alignments of RNA structures
G Blin, A Denise, S Dulucq, C Herrbach, H Touzet
Computational Biology and Bioinformatics, IEEE/ACM Transactions on 7 (2 …, 2010
MATAM: reconstruction of phylogenetic marker genes from short sequencing reads in metagenomes
P Pericard, Y Dufresne, L Couderc, S Blanquart, H Touzet
Bioinformatics 34 (4), 585-591, 2018
Proteomic characterisation of leech microglia extracellular vesicles (EVs): comparison between differential ultracentrifugation and Optiprep™ density gradient isolation
T Arab, A Raffo-Romero, C Van Camp, Q Lemaire, F Le Marrec-Croq, ...
Journal of extracellular vesicles 8 (1), 1603048, 2019
A complete protocol for whole-genome sequencing of virus from clinical samples: Application to coronavirus OC43
F Maurier, D Beury, L Fléchon, JS Varré, H Touzet, A Goffard, D Hot, ...
Virology 531, 141-148, 2019
A linear tree edit distance algorithm for similar ordered trees
H Touzet
Combinatorial Pattern Matching, 334-345, 2005
TFM-Explorer: mining cis-regulatory regions in genomes
L Tonon, H Touzet, JS Varrï¿ ½
Nucleic acids research 38 (suppl_2), W286-W292, 2010
Decomposition algorithms for the tree edit distance problem
S Dulucq, H Touzet
Journal of Discrete Algorithms 3 (2-4), 448-471, 2005
Comparative assessment of long-read error correction software applied to Nanopore RNA-sequencing data
L Lima, C Marchet, S Caboche, C Da Silva, B Istace, JM Aury, H Touzet, ...
Briefings in bioinformatics 21 (4), 1164-1181, 2020
RNAspace. org: An integrated environment for the prediction, annotation, and analysis of ncRNA
MJ Cros, A de Monte, J Mariette, P Bardou, B Grenier-Boley, D Gautheret, ...
Rna 17 (11), 1947-1956, 2011
How to compare arc-annotated sequences: The alignment hierarchy
G Blin, H Touzet
String Processing and Information Retrieval, 291-303, 2006
Encoding the Hydra battle as a rewrite system
H Touzet
Mathematical Foundations of Computer Science 1998, 267-276, 1998
Large scale matching for position weight matrices
A Liefooghe, H Touzet, JS Varré
Combinatorial Pattern Matching, 401-412, 2006
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