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Chunyu Ma
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Striatal neurons directly converted from Huntington’s disease patient fibroblasts recapitulate age-associated disease phenotypes
MB Victor, M Richner, HE Olsen, SW Lee, AM Monteys, C Ma, CJ Huh, ...
Nature neuroscience 21 (3), 341-352, 2018
2282018
xMWAS: a data-driven integration and differential network analysis tool
K Uppal, C Ma, YM Go, DP Jones
Bioinformatics 34 (4), 701-702, 2018
1432018
Reciprocal genomic evolution in the ant–fungus agricultural symbiosis
S Nygaard, H Hu, C Li, M Schiøtt, Z Chen, Z Yang, Q Xie, C Ma, Y Deng, ...
Nature Communications 7 (1), 12233, 2016
1382016
Reference standardization for quantification and harmonization of large-scale metabolomics
KH Liu, M Nellis, K Uppal, C Ma, VL Tran, Y Liang, DI Walker, DP Jones
Analytical chemistry 92 (13), 8836-8844, 2020
1332020
Arginine and carnitine metabolites are altered in diabetic retinopathy
K Sumarriva, K Uppal, C Ma, DJ Herren, Y Wang, IM Chocron, C Warden, ...
Investigative ophthalmology & visual science 60 (8), 3119-3126, 2019
742019
Biolink Model: A universal schema for knowledge graphs in clinical, biomedical, and translational science
DR Unni, SAT Moxon, M Bada, M Brush, R Bruskiewich, JH Caufield, ...
Clinical and translational science 15 (8), 1848-1855, 2022
642022
Low-dose cadmium disrupts mitochondrial citric acid cycle and lipid metabolism in mouse lung
X Hu, JD Chandler, S Park, K Liu, J Fernandes, M Orr, MR Smith, C Ma, ...
Free Radical Biology and Medicine 131, 209-217, 2019
602019
Addressing the batch effect issue for LC/MS metabolomics data in data preprocessing
Q Liu, D Walker, K Uppal, Z Liu, C Ma, VL Tran, S Li, DP Jones, T Yu
Scientific reports 10 (1), 13856, 2020
562020
A scalable workflow to characterize the human exposome
X Hu, DI Walker, Y Liang, MR Smith, ML Orr, BD Juran, C Ma, K Uppal, ...
Nature communications 12 (1), 5575, 2021
492021
Microbial metabolite delta-valerobetaine is a diet-dependent obesogen
KH Liu, JA Owens, B Saeedi, CE Cohen, MP Bellissimo, C Naudin, ...
Nature Metabolism 3 (12), 1694-1705, 2021
402021
Phytochelatin database: a resource for phytochelatin complexes of nutritional and environmental metals
KK Dennis, K Uppal, KH Liu, C Ma, B Liang, YM Go, DP Jones
Database 2019, baz083, 2019
382019
RTX-KG2: a system for building a semantically standardized knowledge graph for translational biomedicine
EC Wood, AK Glen, LG Kvarfordt, F Womack, L Acevedo, TS Yoon, C Ma, ...
BMC bioinformatics 23 (1), 400, 2022
33*2022
Progress toward a universal biomedical data translator
K Fecho, AE Thessen, SE Baranzini, C Bizon, JJ Hadlock, S Huang, ...
Clinical and Translational Science 15 (8), 1838-1847, 2022
262022
Driving cessation over a 24-year period: Dementia severity and cerebrospinal fluid biomarkers
SH Stout, GM Babulal, C Ma, DB Carr, DM Head, EA Grant, MM Williams, ...
Alzheimer's & Dementia 14 (5), 610-616, 2018
192018
Plasma metabolomics of intermediate and neovascular age-related macular degeneration patients
SL Mitchell, C Ma, WK Scott, A Agarwal, MA Pericak-Vance, JL Haines, ...
Cells 10 (11), 3141, 2021
162021
Metabolomics of Aerobic Exercise in Chronic Stroke Survivors: A Pilot Study
MC Serra, CJ Accardi, C Ma, Y Park, VL Tran, DP Jones, CE Hafer-Macko, ...
Journal of Stroke and Cerebrovascular Diseases 28 (12), 104453, 2019
152019
KGML-xDTD: a knowledge graph–based machine learning framework for drug treatment prediction and mechanism description
C Ma, Z Zhou, H Liu, D Koslicki
GigaScience 12, giad057, 2023
14*2023
YACHT: an ANI-based statistical test to detect microbial presence/absence in a metagenomic sample
D Koslicki, S White, C Ma, A Novikov
Bioinformatics 40 (2), btae047, 2024
92024
Metabolomics analysis of aspirin's effects in human colon tissue and associations with adenoma risk
EL Barry, V Fedirko, K Uppal, C Ma, K Liu, LA Mott, JL Peacock, ...
Cancer Prevention Research 13 (10), 863-876, 2020
92020
FeatSNP: an interactive database for brain-specific epigenetic annotation of human SNPs
C Ma, P Madden, P Gontarz, T Wang, B Zhang
Frontiers in genetics 10, 262, 2019
92019
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Articles 1–20