| A map of human genome variation from population-scale sequencing GP Consortium Nature 467 (7319), 1061-1073, 2010 | 8971* | 2010 |
| An improved general amino acid replacement matrix SQ Le, O Gascuel Molecular biology and evolution 25 (7), 1307-1320, 2008 | 3221 | 2008 |
| Resistance to malaria through structural variation of red blood cell invasion receptors EM Leffler, G Band, GBJ Busby, K Kivinen, QS Le, GM Clarke, KA Bojang, ... Science 356 (6343), eaam6393, 2017 | 366* | 2017 |
| Empirical profile mixture models for phylogenetic reconstruction L Si Quang, O Gascuel, N Lartillot Bioinformatics 24 (20), 2317-2323, 2008 | 346 | 2008 |
| Phylogenetic mixture models for proteins SQ Le, N Lartillot, O Gascuel Philosophical Transactions of the Royal Society B: Biological Sciences 363 …, 2008 | 253 | 2008 |
| Reappraisal of known malaria resistance loci in a large multicenter study Nature genetics 46 (11), 1197-1204, 2014 | 250 | 2014 |
| Modeling protein evolution with several amino acid replacement matrices depending on site rates SQ Le, CC Dang, O Gascuel Molecular biology and evolution 29 (10), 2921-2936, 2012 | 227 | 2012 |
| A novel locus of resistance to severe malaria in a region of ancient balancing selection Malaria Genomic Epidemiology Network Writing group Band Gavin 1 Rockett Kirk ... Nature 526 (7572), 253-257, 2015 | 215 | 2015 |
| SNP detection and genotyping from low-coverage sequencing data on multiple diploid samples SQ Le, R Durbin Genome research 21 (6), 952-960, 2011 | 180 | 2011 |
| Insights into malaria susceptibility using genome-wide data on 17,000 individuals from Africa, Asia and Oceania Nature communications 10 (1), 5732, 2019 | 160 | 2019 |
| Admixture into and within sub-Saharan Africa GBJ Busby, G Band, Q Si Le, M Jallow, E Bougama, VD Mangano, ... elife 5, e15266, 2016 | 144 | 2016 |
| Imputation-based meta-analysis of severe malaria in three African populations G Band, QS Le, L Jostins, M Pirinen, K Kivinen, M Jallow, F Sisay-Joof, ... PLoS genetics 9 (5), e1003509, 2013 | 125 | 2013 |
| Accounting for solvent accessibility and secondary structure in protein phylogenetics is clearly beneficial SQ Le, O Gascuel Systematic Biology 59 (3), 277-287, 2010 | 108 | 2010 |
| An association-based dissimilarity measure for categorical data SQ Le, TB Ho Pattern Recognition Letters 26 (16), 2549-2557, 2005 | 104 | 2005 |
| FLU, an amino acid substitution model for influenza proteins CC Dang, QS Le, O Gascuel, VS Le BMC evolutionary biology 10, 1-11, 2010 | 78 | 2010 |
| Mining hepatitis data with temporal abstraction TB Ho, TD Nguyen, S Kawasaki, SQ Le, DD Nguyen, H Yokoi, ... Proceedings of the ninth ACM SIGKDD international conference on Knowledge …, 2003 | 61 | 2003 |
| Improved mitochondrial amino acid substitution models for metazoan evolutionary studies VS Le, CC Dang, QS Le BMC Evolutionary Biology 17, 1-13, 2017 | 34 | 2017 |
| A novel graph-based similarity measure for 2D chemical structures SQ Le, TB Ho, TTH Phan Genome Informatics 15 (2), 82-91, 2004 | 30 | 2004 |
| ReplacementMatrix: a web server for maximum-likelihood estimation of amino acid replacement rate matrices CC Dang, V Lefort, VS Le, QS Le, O Gascuel Bioinformatics 27 (19), 2758-2760, 2011 | 23 | 2011 |
| FastMG: a simple, fast, and accurate maximum likelihood procedure to estimate amino acid replacement rate matrices from large data sets CC Dang, VS Le, O Gascuel, B Hazes, QS Le BMC bioinformatics 15, 1-10, 2014 | 21 | 2014 |
