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Perepelytsya S. M.
Perepelytsya S. M.
Bogolyubov Institute for Theforetical Physics of the National Academy of Sciences of Ukraine
Verified email at bitp.kiev.ua
Title
Cited by
Cited by
Year
Counterion vibrations in the DNA low-frequency spectra
SM Perepelytsya, SN Volkov
The European Physical Journal E 24, 261-269, 2007
432007
Ion mode in the DNA low-frequency vibration spectra
SM Perepelytsya, SN Volkov
Укр. фіз. журн. 49 (11), 1072-1077, 2004
342004
Intensities of DNA ion-phosphate modes in the low-frequency Raman spectra
SM Perepelytsya, SN Volkov
The European Physical Journal E 31, 201-205, 2010
272010
Pattern preferences of DNA nucleotide motifs by polyamines putrescine2+, spermidine3+ and spermine4+
S Perepelytsya, J Uličný, A Laaksonen, F Mocci
Nucleic acids research 47 (12), 6084-6097, 2019
252019
Texture formation in DNA films with alkali metal chlorides
SM Perepelytsya, GM Glibitskiy, SN Volkov
Biopolymers: Original Research on Biomolecules 99 (8), 508-516, 2013
182013
Hydration of counterions interacting with DNA double helix: a molecular dynamics study
S Perepelytsya
Journal of Molecular Modeling 24, 1-18, 2018
172018
Observation of the DNA ion-phosphate vibrations
LA Bulavin, SN Volkov, SY Kutovy, SM Perepelytsya
arXiv preprint arXiv:0805.0696, 2008
142008
Low-frequency vibrations of DNA with counterions in cross-stranded position
SM Perepelytsya, SN Volkov
Ukr. J. Phys 55 (11), 1182-1188, 2010
132010
Understanding the mechanism of DNA deactivation in ion therapy of cancer cells: hydrogen peroxide action
DV Piatnytskyi, OO Zdorevskyi, SM Perepelytsya, SN Volkov
The European Physical Journal D 69, 1-7, 2015
102015
Vibrations of ordered counterions around left-and right-handed DNA double helixes
SM Perepelytsya, SN Volkov
Journal of Physics: Conference Series 438 (1), 012013, 2013
92013
Dynamics of ion-phosphate lattice of DNA in left-handed double helix form
SM Perepelytsya, SN Volkov
arXiv preprint arXiv:1304.8009, 2013
82013
Positively and negatively hydrated counterions in molecular dynamics simulations of DNA double helix
S Perepelytsya
arXiv:1912.11870 [q-bio.BM], 2019
72019
Structuring of counterions around DNA double helix: a molecular dynamics study
OO Liubysh, AV Vlasiuk, SM Perepelytsya
arXiv preprint arXiv:1503.05334, 2015
72015
Effect of ionic ordering in conductivity experiments of DNA aqueous solutions
SM Liubysh, OO and Alekseev, OM and Tkachov, S Yu and Perepelytsya
Ukrainian Journal of Physics 59 (5), 479-486, 2014
6*2014
Caging Polycations: Effect of Increasing Confinement on the Modes of Interaction of Spermidine3+ With DNA Double Helices
T Vasiliu, F Mocci, A Laaksonen, LDV Engelbrecht, S Perepelytsya
Frontiers in Chemistry 10, 836994, 2022
52022
DNA-Polyamine Interactions: Insight from Molecular Dynamics Simulations on the Sequence-Specific Binding of Spermidine3+
F Mocci, A Laaksonen, L Engelbrecht, T Vasiliu, S Perepelytsya
Soft Matter Systems for Biomedical Applications, 163-192, 2022
52022
Molecular perspective on solutions and liquid mixtures from modelling and experiment
LV Engelbrecht, F Mocci, Y Wang, S Perepelytsya, T Vasiliu, A Laaksonen
Soft matter systems for biomedical applications, 53-84, 2022
52022
Dynamics of K+ counterions around DNA double helix in the external electric field: A molecular dynamics study
OO Zdorevskyi, SM Perepelytsya
The European Physical Journal E 43, 1-10, 2020
52020
Molecular dynamics study of the competitive binding of hydrogen peroxide and water molecules with DNA phosphate groups
S Perepelytsya, J Uličný, SN Volkov
European Biophysics Journal 50 (5), 759-770, 2021
42021
Low-frequency vibrations of water molecules in DNA minor groove
TL Bubon, SM Perepelytsya
The European Physical Journal E 44 (6), 84, 2021
42021
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