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Dan Gillespie
Dan Gillespie
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Title
Cited by
Cited by
Year
Exact stochastic simulation of coupled chemical reactions
DT Gillespie
The journal of physical chemistry 81 (25), 2340-2361, 1977
114741977
A general method for numerically simulating the stochastic time evolution of coupled chemical reactions
DT Gillespie
Journal of computational physics 22 (4), 403-434, 1976
68721976
Stochastic simulation of chemical kinetics
DT Gillespie
Annual review of physical chemistry 58 (1), 35-55, 2007
22522007
Approximate accelerated stochastic simulation of chemically reacting systems
DT Gillespie
The Journal of chemical physics 115 (4), 1716-1733, 2001
21912001
The chemical Langevin equation
DT Gillespie
The Journal of Chemical Physics 113 (1), 297-306, 2000
16692000
A rigorous derivation of the chemical master equation
DT Gillespie
Physica A: Statistical Mechanics and its Applications 188 (1-3), 404-425, 1992
13641992
Markov processes: an introduction for physical scientists
DT Gillespie
Elsevier, 1991
10041991
Efficient step size selection for the tau-leaping simulation method
Y Cao, DT Gillespie, LR Petzold
The Journal of chemical physics 124 (4), 044109, 2006
7502006
The slow-scale stochastic simulation algorithm
Y Cao, DT Gillespie, LR Petzold
The Journal of chemical physics 122 (1), 014116, 2005
6012005
Exact numerical simulation of the Ornstein-Uhlenbeck process and its integral
DT Gillespie
Physical review E 54 (2), 2084, 1996
5801996
Stiffness in stochastic chemically reacting systems: The implicit tau-leaping method
M Rathinam, LR Petzold, Y Cao, DT Gillespie
The Journal of Chemical Physics 119 (24), 12784-12794, 2003
5432003
Improved leap-size selection for accelerated stochastic simulation
DT Gillespie, LR Petzold
The journal of chemical physics 119 (16), 8229-8234, 2003
5242003
The mathematics of Brownian motion and Johnson noise
DT Gillespie
American Journal of Physics 64 (3), 225-240, 1996
3511996
Perspective: Stochastic algorithms for chemical kinetics
DT Gillespie, A Hellander, LR Petzold
The Journal of chemical physics 138 (17), 05B201_1, 2013
3452013
Avoiding negative populations in explicit Poisson tau-leaping
Y Cao, DT Gillespie, LR Petzold
The Journal of chemical physics 123 (5), 054104, 2005
3362005
An exact method for numerically simulating the stochastic coalescence process in a cloud
DT Gillespie
Journal of Atmospheric Sciences 32 (10), 1977-1989, 1975
2791975
Multiscale stochastic simulation algorithm with stochastic partial equilibrium assumption for chemically reacting systems
Y Cao, D Gillespie, L Petzold
Journal of Computational Physics 206 (2), 395-411, 2005
2422005
Adaptive explicit-implicit tau-leaping method with automatic tau selection
Y Cao, DT Gillespie, LR Petzold
The Journal of chemical physics 126 (22), 224101, 2007
2332007
Algorithms and software for stochastic simulation of biochemical reacting systems
H Li, Y Cao, LR Petzold, DT Gillespie
Biotechnology progress 24 (1), 56-61, 2008
2112008
Stochastic modelling of gene regulatory networks
H El Samad, M Khammash, L Petzold, D Gillespie
International Journal of Robust and Nonlinear Control: IFAC‐Affiliated …, 2005
1932005
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