Danesh MoradiGaravand
Danesh MoradiGaravand
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Prediction of antibiotic resistance in Escherichia coli from large-scale pan-genome data
D Moradigaravand, M Palm, A Farewell, V Mustonen, J Warringer, L Parts
PLoS computational biology 14 (12), e1006258, 2018
Evolution and Epidemiology of Multidrug-Resistant Klebsiella pneumoniae in the United Kingdom and Ireland
D Moradigaravand, V Martin, SJ Peacock, J Parkhill
MBio 8 (1), 10.1128/mbio. 01976-16, 2017
What is resistance? Impact of phenotypic versus molecular drug resistance testing on therapy for multi-and extensively drug-resistant tuberculosis
J Heyckendorf, S Andres, CU Köser, ID Olaru, T Schön, E Sturegård, ...
Antimicrobial agents and chemotherapy 62 (2), 10.1128/aac. 01550-17, 2018
Recent independent emergence of multiple multidrug-resistant Serratia marcescens clones within the United Kingdom and Ireland
D Moradigaravand, CJ Boinett, V Martin, SJ Peacock, J Parkhill
Genome research 26 (8), 1101-1109, 2016
Whole genome sequencing reveals high-resolution epidemiological links between clinical and environmental Klebsiella pneumoniae
C Runcharoen, D Moradigaravand, B Blane, S Paksanont, ...
Genome medicine 9, 1-10, 2017
Phylogenetically informative mutations in genes implicated in antibiotic resistance in Mycobacterium tuberculosis complex
M Merker, TA Kohl, I Barilar, S Andres, PW Fowler, E Chryssanthou, ...
Genome Medicine 12, 1-8, 2020
The essential mycobacterial amidotransferase GatCAB is a modulator of specific translational fidelity
HW Su, JH Zhu, H Li, RJ Cai, C Ealand, X Wang, YX Chen, TF Zhu, ...
Nature microbiology 1 (11), 1-9, 2016
A One Health Study of the Genetic Relatedness of Klebsiella pneumoniae and Their Mobile Elements in the East of England
C Ludden, D Moradigaravand, D Jamrozy, T Gouliouris, B Blane, ...
Clinical Infectious Diseases 70 (2), 219-226, 2020
Detection of vancomycin-resistant Enterococcus faecium hospital-adapted lineages in municipal wastewater treatment plants indicates widespread distribution and release into the …
T Gouliouris, KE Raven, D Moradigaravand, C Ludden, F Coll, B Blane, ...
Genome research 29 (4), 626-634, 2019
Evolution of the Staphylococcus argenteus ST2250 Clone in Northeastern Thailand Is Linked with the Acquisition of Livestock-Associated Staphylococcal Genes
D Moradigaravand, D Jamrozy, R Mostowy, A Anderson, EK Nickerson, ...
MBio 8 (4), 10.1128/mbio. 00802-17, 2017
Some Synonymous and Nonsynonymous gyrA Mutations in Mycobacterium tuberculosis Lead to Systematic False-Positive Fluoroquinolone Resistance Results with the Hain …
A Ajileye, N Alvarez, M Merker, TM Walker, S Akter, K Brown, ...
Antimicrobial agents and chemotherapy 61 (4), 10.1128/aac. 02169-16, 2017
Population Structure of Multidrug-Resistant Klebsiella oxytoca within Hospitals across the United Kingdom and Ireland Identifies Sharing of Virulence and Resistance Genes …
D Moradigaravand, V Martin, SJ Peacock, J Parkhill
Genome biology and evolution 9 (3), 574-584, 2017
Role of Alanine Racemase Mutations in Mycobacterium tuberculosisd-Cycloserine Resistance
Y Nakatani, HK Opel-Reading, M Merker, D Machado, S Andres, ...
Antimicrobial agents and chemotherapy 61 (12), 10.1128/aac. 01575-17, 2017
Recombination accelerates adaptation on a large-scale empirical fitness landscape in HIV-1
D Moradigaravand, R Kouyos, T Hinkley, M Haddad, CJ Petropoulos, ...
PLoS genetics 10 (6), e1004439, 2014
The evolution of natural competence: disentangling costs and benefits of sex in bacteria
D Moradigaravand, J Engelstädter
The American Naturalist 182 (4), E112-E126, 2013
Whole-genome sequencing of multidrug-resistant Mycobacterium tuberculosis isolates from Myanmar
HL Aung, T Tun, D Moradigaravand, CU Köser, WW Nyunt, ST Aung, ...
Journal of global antimicrobial resistance 6, 113-117, 2016
Within-host evolution of Enterococcus faecium during longitudinal carriage and transition to bloodstream infection in immunocompromised patients
D Moradigaravand, T Gouliouris, B Blane, P Naydenova, C Ludden, ...
Genome medicine 9, 1-11, 2017
The effect of bacterial recombination on adaptation on fitness landscapes with limited peak accessibility
D Moradigaravand, J Engelstädter
PLoS computational biology 8 (10), e1002735, 2012
The dissemination of multidrug-resistant Enterobacter cloacae throughout the UK and Ireland
D Moradigaravand, S Reuter, V Martin, SJ Peacock, J Parkhill
Nature microbiology 1 (12), 1-5, 2016
Genomic survey of Clostridium difficile reservoirs in the East of England implicates environmental contamination of wastewater treatment plants by clinical lineages
D Moradigaravand, T Gouliouris, C Ludden, S Reuter, D Jamrozy, ...
Microbial genomics 4 (3), e000162, 2018
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