Pawel Herzyk

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Matthew DalbyProfessor of Cell Engineering, University of GlasgowVerified email at glasgow.ac.uk
Rainer BreitlingProfessor of Systems Biology, Manchester Institute of Biotechnology, University of ManchesterVerified email at manchester.ac.uk
Prof. Nikolaj GadegaardUniversity of GlasgowVerified email at glasgow.ac.uk
Roderick HubbardUniversity of York and Vernalis (R&D) LtdVerified email at york.ac.uk
Julian DowProfessor of Molecular and Integrative Physiology, University of GlasgowVerified email at glasgow.ac.uk
Mathis O RiehleReader in Cell Engineering, University of GlasgowVerified email at glasgow.ac.uk
Patrick ArmengaudGlasgow, Amiens, Versailles, MontpellierVerified email at versailles.inra.fr
Dale SandersUniversity of YorkVerified email at york.ac.uk
Mani MudaliarCerevance, LtdVerified email at cerevance.com
Stephen NeidleEmeritus Professor of Chemical Biology, The UCL School of Pharmacy, University of LondonVerified email at ucl.ac.uk
Penelope M TsimbouriUniversity of GlsagowVerified email at glasgow.ac.uk
Eirini KaiserliSchool of Molecular Biosciences, College of Medical, Veterinary and Life Sciences, University ofVerified email at glasgow.ac.uk
Shireen DaviesUniversity of GlasgowVerified email at glasgow.ac.uk
Nicholas J DickensAmazon Web ServicesVerified email at amazon.com
Karl BurgessProfessor, University of EdinburghVerified email at ed.ac.uk
Ruth ZadoksProfessor of Production Animal Health, University of SydneyVerified email at sydney.edu.au
David EckersallProfessor of Veterinary Biochemistry, SBOHVM, University of GlasgowVerified email at glasgow.ac.uk
Daniel J. KliebensteinPlant Sciences, University of California, DavisVerified email at ucdavis.edu
Jane RobinsonReader, IBAHCM, College of Medicine, Veterinary Medicine and Life Sciences, University of GlasgowVerified email at glasgow.ac.uk
Valeria MarascoAssistant Professor, Research Institute of Wildlife Ecology, Vetmeduni ViennaVerified email at vetmeduni.ac.at

Pawel Herzyk

Senior Lecturer & Head of Sequencing, MCSB and Glasgow Polyomics at the University of Glasgow

Verified email at glasgow.ac.uk - Homepage

genomics transcriptomics bioinformatics next-generation sequencing


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The control of human mesenchymal cell differentiation using nanoscale symmetry and disorder MJ Dalby, N Gadegaard, R Tare, A Andar, MO Riehle, P Herzyk, ... Nature materials 6 (12), 997-1003, 2007	2759	2007
Rank products: a simple, yet powerful, new method to detect differentially regulated genes in replicated microarray experiments R Breitling, P Armengaud, A Amtmann, P Herzyk FEBS letters 573 (1-3), 83-92, 2004	1833	2004
A UV-B-specific signaling component orchestrates plant UV protection BA Brown, C Cloix, GH Jiang, E Kaiserli, P Herzyk, DJ Kliebenstein, ... Proceedings of the National Academy of Sciences 102 (50), 18225-18230, 2005	644	2005
Chromosome and gene copy number variation allow major structural change between species and strains of Leishmania MB Rogers, JD Hilley, NJ Dickens, J Wilkes, PA Bates, DP Depledge, ... Genome research 21 (12), 2129-2142, 2011	537	2011
Transcriptome analysis of root transporters reveals participation of multiple gene families in the response to cation stress FJM Maathuis, V Filatov, P Herzyk, G C. Krijger, K B. Axelsen, S Chen, ... The Plant Journal 35 (6), 675-692, 2003	366	2003
Alternative Splicing Mediates Responses of the Arabidopsis Circadian Clock to Temperature Changes AB James, NH Syed, S Bordage, J Marshall, GA Nimmo, GI Jenkins, ... The Plant Cell 24 (3), 961-981, 2012	359	2012
Hyperosmotic priming of Arabidopsis seedlings establishes a long-term somatic memory accompanied by specific changes of the epigenome E Sani, P Herzyk, G Perrella, V Colot, A Amtmann Genome biology 14, 1-24, 2013	357	2013
The Circadian Clock in Arabidopsis Roots Is a Simplified Slave Version of the Clock in Shoots AB James, JA Monreal, GA Nimmo, CL Kelly, P Herzyk, GI Jenkins, ... Science 322 (5909), 1832-1835, 2008	304	2008
High-resolution human cytomegalovirus transcriptome D Gatherer, S Seirafian, C Cunningham, M Holton, DJ Dargan, ... Proceedings of the National Academy of Sciences 108 (49), 19755-19760, 2011	277	2011
Function-informed transcriptome analysis of Drosophila renal tubule J Wang, L Kean, J Yang, AK Allan, SA Davies, P Herzyk, JAT Dow Genome biology 5, 1-21, 2004	249	2004
Iterative Group Analysis (iGA): a simple tool to enhance sensitivity and facilitate interpretation of microarray experiments R Breitling, A Amtmann, P Herzyk BMC bioinformatics 5, 1-8, 2004	198	2004
Rank-based methods as a non-parametric alternative of the T-statistic for the analysis of biological microarray data R Breitling, P Herzyk Journal of bioinformatics and computational biology 3 (05), 1171-1189, 2005	194	2005
FlyAtlas: database of gene expression in the tissues of Drosophila melanogaster SW Robinson, P Herzyk, JAT Dow, DP Leader Nucleic acids research 41 (D1), D744-D750, 2013	187	2013
Scanning peptide array analyses identify overlapping binding sites for the signalling scaffold proteins, β-arrestin and RACK1, in cAMP-specific phosphodiesterase PDE4D5 GB Bolger, GS Baillie, X Li, MJ Lynch, P Herzyk, A Mohamed, ... Biochemical Journal 398 (1), 23-36, 2006	181	2006
Beyond the consensus: dissecting within-host viral population diversity of foot-and-mouth disease virus by using next-generation genome sequencing CF Wright, MJ Morelli, G Thébaud, NJ Knowles, P Herzyk, DJ Paton, ... Journal of virology 85 (5), 2266-2275, 2011	173	2011
The role of microtopography in cellular mechanotransduction LE McNamara, R Burchmore, MO Riehle, P Herzyk, MJP Biggs, ... Biomaterials 33 (10), 2835-2847, 2012	165	2012
Nanotopographical effects on mesenchymal stem cell morphology and phenotype P Tsimbouri, N Gadegaard, K Burgess, K White, P Reynolds, P Herzyk, ... Journal of cellular biochemistry 115 (2), 380-390, 2014	144	2014
Rapid disruption of axon–glial integrity in response to mild cerebral hypoperfusion MM Reimer, J McQueen, L Searcy, G Scullion, B Zonta, A Desmazieres, ... Journal of Neuroscience 31 (49), 18185-18194, 2011	138	2011
Automated method for modeling seven-helix transmembrane receptors from experimental data P Herzyk, RE Hubbard Biophysical journal 69 (6), 2419-2442, 1995	132	1995
Metal selectivity determinants in a family of transition metal transporters D Podar, J Scherer, Z Noordally, P Herzyk, D Nies, D Sanders Journal of Biological Chemistry 287 (5), 3185-3196, 2012	127	2012

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