Marco Mignardi
Marco Mignardi
Stanford University - Uppsala University
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Single-cell transcriptomics of 20 mouse organs creates a Tabula Muris: The Tabula Muris Consortium
N Schaum, J Karkanias, NF Neff, AP May, SR Quake, T Wyss-Coray, ...
Nature 562 (7727), 367, 2018
In situ sequencing for RNA analysis in preserved tissue and cells
R Ke, M Mignardi, A Pacureanu, J Svedlund, J Botling, C Wählby, ...
Nature methods 10 (9), 857-860, 2013
Single-cell RNA-seq analysis of infiltrating neoplastic cells at the migrating front of human glioblastoma
S Darmanis, SA Sloan, D Croote, M Mignardi, S Chernikova, ...
Cell reports 21 (5), 1399-1410, 2017
Single-cell analysis of human pancreas reveals transcriptional signatures of aging and somatic mutation patterns
M Enge, HE Arda, M Mignardi, J Beausang, R Bottino, SK Kim, SR Quake
Cell 171 (2), 321-330. e14, 2017
Single-cell transcriptomic atlas of the human endometrium during the menstrual cycle
W Wang, F Vilella, P Alama, I Moreno, M Mignardi, A Isakova, W Pan, ...
Nature Medicine 26 (10), 1644-1653, 2020
In situ detection of individual mRNA molecules and protein complexes or post-translational modifications using padlock probes combined with the in situ proximity …
I Weibrecht, E Lundin, S Kiflemariam, M Mignardi, I Grundberg, C Larsson, ...
Nature protocols 8 (2), 355-372, 2013
Fourth generation of next‐generation sequencing technologies: Promise and consequences
R Ke, M Mignardi, T Hauling, M Nilsson
Human mutation 37 (12), 1363-1367, 2016
Spatial analysis to detect sequence variants
C Galonska, M Mignardi
US Patent 11,608,520, 2023
Oligonucleotide gap-fill ligation for mutation detection and sequencing in situ
M Mignardi, A Mezger, X Qian, L La Fleur, J Botling, C Larsson, M Nilsson
Nucleic Acids Research 43 (22), e151-e151, 2015
In situ mutation detection and visualization of intratumor heterogeneity for cancer research and diagnostics
I Grundberg, S Kiflemariam, M Mignardi, J Imgenberg-Kreuz, K Edlund, ...
Oncotarget 4 (12), 2407, 2013
Analyte capture from an embedded biological sample
M Mignardi
US Patent App. 17/881,086, 2023
Fourth-generation sequencing in the cell and the clinic
M Mignardi, M Nilsson
Genome medicine 6, 1-4, 2014
RollFISH achieves robust quantification of single-molecule RNA biomarkers in paraffin-embedded tumor tissue samples
C Wu, M Simonetti, C Rossell, M Mignardi, R Mirzazadeh, L Annaratone, ...
Communications biology 1 (1), 209, 2018
Regeneration-associated WNT signaling is activated in long-term reconstituting AC133bright acute myeloid leukemia cells
A Beghini, F Corlazzoli, L Del Giacco, M Re, F Lazzaroni, M Brioschi, ...
Neoplasia 14 (12), 1236-IN45, 2012
Spatial analysis to detect sequence variants
C Galonska, M Mignardi
US Patent App. 18/179,795, 2023
In situ sequencing identifies TMPRSS2–ERG fusion transcripts, somatic point mutations and gene expression levels in prostate cancers
S Kiflemariam, M Mignardi, MA Ali, A Bergh, M Nilsson, T Sjöblom
The Journal of pathology 234 (2), 253-261, 2014
New technologies for DNA analysis–a review of the READNA Project
S McGinn, D Bauer, T Brefort, L Dong, A El-Sagheer, A Elsharawy, ...
New biotechnology 33 (3), 311-330, 2016
Bridging histology and bioinformatics—computational analysis of spatially resolved transcriptomics
M Mignardi, O Ishaq, X Qian, C Wählby
Proceedings of the IEEE 105 (3), 530-541, 2016
Modeling spatial correlation of transcripts with application to developing pancreas
R Liu, M Mignardi, R Jones, M Enge, SK Kim, SR Quake, J Zou
Scientific reports 9 (1), 5592, 2019
Image based in situ sequencing for RNA analysis in tissue
A Pacureanu, R Ke, M Mignardi, M Nilsson, C Wählby
2014 IEEE 11th International Symposium on Biomedical Imaging (ISBI), 286-289, 2014
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