| Human induced pluripotent stem cell–derived cardiomyocytes recapitulate the predilection of breast cancer patients to doxorubicin-induced cardiotoxicity PW Burridge, YF Li, E Matsa, H Wu, SG Ong, A Sharma, A Holmström, ... Nature medicine 22 (5), 547-556, 2016 | 717 | 2016 |
| Learning your identity and disease from research papers: information leaks in genome wide association study R Wang, YF Li, XF Wang, H Tang, X Zhou Proceedings of the 16th ACM conference on Computer and communications …, 2009 | 337 | 2009 |
| HEx: A heterologous expression platform for the discovery of fungal natural products CJB Harvey, M Tang, U Schlecht, J Horecka, CR Fischer, HC Lin, J Li, ... Science advances 4 (4), eaar5459, 2018 | 213 | 2018 |
| “Reverse ecology” and the power of population genomics YF Li, JC Costello, AK Holloway, MW Hahn Evolution 62 (12), 2984-2994, 2008 | 156 | 2008 |
| Comprehensive curation and analysis of fungal biosynthetic gene clusters of published natural products YF Li, KJS Tsai, CJB Harvey, JJ Li, BE Ary, EE Berlew, BL Boehman, ... Fungal Genetics and Biology 89, 18-28, 2016 | 118 | 2016 |
| To release or not to release: evaluating information leaks in aggregate human-genome data X Zhou, B Peng, Y Li, Y Chen, H Tang, XF Wang Computer Security–ESORICS 2011, 607-627, 2011 | 108 | 2011 |
| A Bayesian approach to protein inference problem in shotgun proteomics YF Li, RJ Arnold, Y Li, P Radivojac, Q Sheng, H Tang Journal of Computational Biology 16 (8), 1183-1193, 2009 | 91 | 2009 |
| Assessment of the radiation effects of cardiac CT angiography using protein and genetic biomarkers PK Nguyen, WH Lee, YF Li, WX Hong, S Hu, C Chan, G Liang, I Nguyen, ... Cardiovascular Imaging 8 (8), 873-884, 2015 | 79 | 2015 |
| Computational approaches to protein inference in shotgun proteomics YF Li, P Radivojac BMC bioinformatics 13, 1-19, 2012 | 74 | 2012 |
| The importance of peptide detectability for protein identification, quantification, and experiment design in MS/MS proteomics YF Li, RJ Arnold, H Tang, P Radivojac Journal of proteome research 9 (12), 6288-6297, 2010 | 57 | 2010 |
| A method for high‐throughput production of sequence‐verified DNA libraries and strain collections JD Smith, U Schlecht, W Xu, S Suresh, J Horecka, MJ Proctor, RS Aiyar, ... Molecular systems biology 13 (2), 913, 2017 | 56 | 2017 |
| A Bayesian approach to protein inference problem in shotgun proteomics YF Li, RJ Arnold, Y Li, P Radivojac, Q Sheng, H Tang Research in Computational Molecular Biology: 12th Annual International …, 2008 | 27 | 2008 |
| Structure-based kernels for the prediction of catalytic residues and their involvement in human inherited disease F Xin, S Myers, YF Li, DN Cooper, SD Mooney, P Radivojac Bioinformatics 26 (16), 1975-1982, 2010 | 24 | 2010 |
| Combinatorial libraries of synthetic peptides as a model for shotgun proteomics BC Bohrer, YF Li, JP Reilly, DE Clemmer, RD DiMarchi, P Radivojac, ... Analytical chemistry 82 (15), 6559-6568, 2010 | 17 | 2010 |
| Systematic target function annotation of human transcription factors YF Li, RB Altman BMC biology 16, 1-18, 2018 | 13 | 2018 |
| New mixture models for decoy-free false discovery rate estimation in mass spectrometry proteomics Y Peng, S Jain, YF Li, M Greguš, AR Ivanov, O Vitek, P Radivojac Bioinformatics 36 (Supplement_2), i745-i753, 2020 | 11 | 2020 |
| Protein identification problem from a Bayesian point of view YF Li, RJ Arnold, P Radivojac, H Tang Statistics and Its Interface 5 (1), 21-38, 2012 | 11 | 2012 |
| Investigation of VUV photodissociation propensities using peptide libraries X Liu, YF Li, BC Bohrer, RJ Arnold, P Radivojac, H Tang, JP Reilly International Journal of Mass Spectrometry, 2011 | 7 | 2011 |
| Methods for inferring the presence of a protein in a sample P Radivojac, RJ Arnold, H Tang, P Alves, Y Li US Patent App. 11/923,493, 2008 | 2 | 2008 |
| Evaluation of somatic copy number variation detection by NGS technologies and bioinformatics tools on a hyper-diploid cancer genome D Masood, L Ren, C Nguyen, FG Brundu, L Zheng, Y Zhao, E Jaeger, Y Li, ... Genome Biology 25 (1), 163, 2024 | 1 | 2024 |
