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Chaoyi Xu
Chaoyi Xu
Senior research scientist, Prelude Therapeutics
Verified email at udel.edu
Title
Cited by
Cited by
Year
Inositol phosphates are assembly co-factors for HIV-1
RA Dick, KK Zadrozny, C Xu, FKM Schur, TD Lyddon, CL Ricana, ...
Nature 560 (7719), 509-512, 2018
2082018
FEZ1 is recruited to a conserved cofactor site on capsid to promote HIV-1 trafficking
PT Huang, BJ Summers, C Xu, JR Perilla, V Malikov, MH Naghavi, ...
Cell reports 28 (9), 2373-2385. e7, 2019
672019
Dynamic regulation of HIV-1 capsid interaction with the restriction factor TRIM5α identified by magic-angle spinning NMR and molecular dynamics simulations
CM Quinn, M Wang, MP Fritz, B Runge, J Ahn, C Xu, JR Perilla, ...
Proceedings of the National Academy of Sciences 115 (45), 11519-11524, 2018
582018
Permeability of the HIV-1 capsid to metabolites modulates viral DNA synthesis
C Xu, DK Fischer, S Rankovic, W Li, RA Dick, B Runge, R Zadorozhnyi, ...
PLoS biology 18 (12), e3001015, 2020
482020
MxB restricts HIV-1 by targeting the tri-hexamer interface of the viral capsid
SS Smaga, C Xu, BJ Summers, KM Digianantonio, JR Perilla, Y Xiong
Structure 27 (8), 1234-1245. e5, 2019
462019
Structures of immature EIAV Gag lattices reveal a conserved role for IP6 in lentivirus assembly
RA Dick, C Xu, DR Morado, V Kravchuk, CL Ricana, TD Lyddon, ...
Plos Pathogens 16 (1), e1008277, 2020
442020
Structure of native HIV-1 cores and their interactions with IP6 and CypA
T Ni, Y Zhu, Z Yang, C Xu, Y Chaban, T Nesterova, J Ning, T Böcking, ...
Science Advances 7 (47), eabj5715, 2021
212021
Dysregulation of PRMT5 in chronic lymphocytic leukemia promotes progression with high risk of Richter’s transformation
ZA Hing, JS Walker, EC Whipp, L Brinton, M Cannon, P Zhang, S Sher, ...
Nature Communications 14 (1), 97, 2023
132023
Molecular determinants of Ebola nucleocapsid stability from molecular dynamics simulations
C Xu, N Katyal, T Nesterova, JR Perilla
The Journal of Chemical Physics 153 (15), 2020
122020
The capsid lattice engages a bipartite NUP153 motif to mediate nuclear entry of HIV-1 cores
Q Shen, S Kumari, C Xu, S Jang, J Shi, RC Burdick, L Levintov, Q Xiong, ...
Proceedings of the National Academy of Sciences 120 (13), e2202815120, 2023
92023
Structural basis of HIV-1 maturation inhibitor binding and activity
S Sarkar, KK Zadrozny, R Zadorozhnyi, RW Russell, CM Quinn, ...
Nature Communications 14 (1), 1237, 2023
82023
Magic angle spinning NMR structure of human cofilin-2 assembled on actin filaments reveals isoform-specific conformation and binding mode
J Kraus, RW Russell, E Kudryashova, C Xu, N Katyal, JR Perilla, ...
Nature Communications 13 (1), 2114, 2022
82022
HIV-1 mutants that escape the cytotoxic T-lymphocytes are defective in viral DNA integration
M Balasubramaniam, BO Davids, A Bryer, C Xu, S Thapa, J Shi, C Aiken, ...
PNAS nexus 1 (2), pgac064, 2022
72022
A DNA-origami nuclear pore mimic reveals nuclear entry mechanisms of HIV-1 capsid
Q Shen, C Xu, S Jang, Q Xiong, SC Devarkar, T Tian, GJ Bedwell, ...
bioRxiv, 2020.08. 10.245522, 2020
62020
FEZ1 is recruited to a conserved cofactor site on capsid to promote HIV-1 trafficking. Cell Rep 28: 2373–2385. e7
PT Huang, BJ Summers, C Xu, JR Perilla, V Malikov, MH Naghavi, ...
52019
Multidisciplinary studies with mutated HIV-1 capsid proteins reveal structural mechanisms of lattice stabilization
AT Gres, KA Kirby, WM McFadden, H Du, D Liu, C Xu, AJ Bryer, JR Perilla, ...
Nature Communications 14 (1), 5614, 2023
32023
Author Correction: Inositol phosphates are assembly co-factors for HIV-1
RA Dick, KK Zadrozny, C Xu, FKM Schur, TD Lyddon, CL Ricana, ...
Nature 563 (7731), E22, 2018
32018
Unsupervised Refinement of Protein Structures
AJ Bryer, JS Rey, C Xu, JA Hadden-Perilla, JR Perilla
2023
Large scale all-atom molecular dynamics simulations of mutant CA tubes provide insights on cytotoxic T-lymphocyte-mediated HIV-1 restriction
AJ Bryer, M Balasubramaniam, S Thapa, BO Davids, C Xu, J Shi, C Aiken, ...
Biophysical Journal 121 (3), 321a, 2022
2022
Equilibrium dynamics of the pre-and post-cleavage regions of SP1 are separately shifted by the HIV-1 maturation inhibitor Bevirimat
C Xu, JR Perilla
bioRxiv, 2022.02. 05.479246, 2022
2022
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