Mark D. Robinson

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Charlotte SonesonResearch Associate, FMI, BaselVerified email at fmi.ch
Gordon K SmythDivision Head, Bioinformatics, Walter and Eliza Hall Institute of Medical ResearchVerified email at wehi.edu.au
Lukas M. WeberAssistant Professor, Department of Biostatistics, Boston UniversityVerified email at bu.edu
Carsten KriegAssistant Professor of Immunology, MUSC, Charleston, SCVerified email at cktherapeutics.com
Timothy R. HughesUniversity of TorontoVerified email at utoronto.ca
Silvia GugliettaAssistant Professor of Immunology, Medical University of South Carolina, USAVerified email at musc.edu
susan j clarkprofessor Garvan institute of medical researchVerified email at garvan.org.au
Helena L. CrowellPostdoc - CNAG, Barcelona, SpainVerified email at cnag.eu
Michael I. LoveAssociate Professor, Biostatistics & Genetics, UNC-Chapel HillVerified email at email.unc.edu
Clare StirzakerGarvan Institute of Medical ResearchVerified email at garvan.org.au
Alicia OshlackPeter MacCallum Cancer CentreVerified email at petermac.org
Pierre-Luc GermainUniversity & ETH ZürichVerified email at hest.ethz.ch
Terence P SpeedWalter & Eliza Hall Institute of Medical ResearchVerified email at wehi.edu.au
Christian MosimannJohnson Chair, Associate Professor, University of Colorado School of Medicine AMCVerified email at cuanschutz.edu
Alexa BurgerUniversity of Colorado Anschutz Medical CampusVerified email at cuanschutz.edu
Xiao-Bei ZhouChina Medical UniversityVerified email at cmu.edu.cn
Charity W LawThe Walter and Eliza Hall Institute of Medical ResearchVerified email at wehi.edu.au
Christian von MeringProfessor of Computational Biology, University of Zurich and Swiss Institute of BioinformaticsVerified email at imls.uzh.ch
Simone TiberiAssistant Professor, Department of Statistical Sciences, University of BolognaVerified email at unibo.it
Andrea RieblerDepartment of Mathematical Sciences, NTNU, Trondheim, NorwayVerified email at math.ntnu.no

Mark D. Robinson

Full Professor of Statistical Genomics, University of Zurich

Verified email at mls.uzh.ch - Homepage

Statistics Bioinformatics Transcriptomics Single-Cell Data Analysis Epigenomics


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edgeR: a Bioconductor package for differential expression analysis of digital gene expression data MD Robinson, DJ McCarthy, GK Smyth bioinformatics 26 (1), 139-140, 2010	38985	2010
A scaling normalization method for differential expression analysis of RNA-seq data MD Robinson, A Oshlack Genome biology 11, 1-9, 2010	8172	2010
Comprehensive genomic characterization defines human glioblastoma genes and core pathways Cancer Genome Atlas Research Network Tissue source sites: Duke University ... Nature 455 (7216), 1061-1068, 2008	7596	2008
Differential analyses for RNA-seq: transcript-level estimates improve gene-level inferences C Soneson, MI Love, MD Robinson F1000 Research 4, 1521, 2015	3955	2015
Global landscape of protein complexes in the yeast Saccharomyces cerevisiae NJ Krogan, G Cagney, H Yu, G Zhong, X Guo, A Ignatchenko, J Li, S Pu, ... Nature 440 (7084), 637-643, 2006	3494	2006
Systematic genetic analysis with ordered arrays of yeast deletion mutants AHY Tong, M Evangelista, AB Parsons, H Xu, GD Bader, N Pagé, ... Science 294 (5550), 2364-2368, 2001	2642	2001
Small-sample estimation of negative binomial dispersion, with applications to SAGE data MD Robinson, GK Smyth Biostatistics 9 (2), 321-332, 2008	1342	2008
Count-based differential expression analysis of RNA sequencing data using R and Bioconductor S Anders, DJ McCarthy, Y Chen, M Okoniewski, GK Smyth, W Huber, ... Nature Protocols 8 (9), 1765-86, 2013	1331	2013
Large-scale mapping of human protein-protein interactions by mass spectrometry RM Ewing, P Chu, F Elisma, H Li, P Taylor, S Climie, ... Molecular systems biology 3 (1), 2007	1249	2007
Moderated statistical tests for assessing differences in tag abundance MD Robinson, GK Smyth Bioinformatics 23 (21), 2881-2887, 2007	1137	2007
Eleven grand challenges in single-cell data science D Lähnemann, J Köster, E Szczurek, DJ McCarthy, SC Hicks, ... Genome biology 21 (1), 1-35, 2020	1116	2020
From RNA-seq reads to differential expression results A Oshlack, MD Robinson, MD Young Genome biology 11, 1-10, 2010	981	2010
High-throughput mapping of a dynamic signaling network in mammalian cells M Barrios-Rodiles, KR Brown, B Ozdamar, R Bose, Z Liu, RS Donovan, ... Science 307 (5715), 1621-1625, 2005	889	2005
Bias, robustness and scalability in single-cell differential expression analysis C Soneson, MD Robinson Nature methods 15 (4), 255-261, 2018	748	2018
High-dimensional single-cell analysis predicts response to anti-PD-1 immunotherapy C Krieg, M Nowicka, S Guglietta, S Schindler, FJ Hartmann, LM Weber, ... Nature Medicine 24, 144–153, 2018	717	2018
FunSpec: a web-based cluster interpreter for yeast MD Robinson, J Grigull, N Mohammad, TR Hughes BMC bioinformatics 3, 1-5, 2002	515	2002
CyTOF workflow: differential discovery in high-throughput high-dimensional cytometry datasets M Nowicka, C Krieg, LM Weber, FJ Hartmann, S Guglietta, B Becher, ... F1000 Research 6 (748), 2017	489	2017
Doublet identification in single-cell sequencing data using scDblFinder PL Germain, A Lun, CG Meixide, W Macnair, MD Robinson F1000Research 10 (979), 2022	483	2022
High-definition macromolecular composition of yeast RNA-processing complexes NJ Krogan, WT Peng, G Cagney, MD Robinson, R Haw, G Zhong, X Guo, ... Molecular cell 13 (2), 225-239, 2004	475	2004
Robustly detecting differential expression in RNA sequencing data using observation weights X Zhou, H Lindsay, MD Robinson Nucleic acids research 42 (11), e91-e91, 2014	463	2014

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