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Mathieu Fourment
Mathieu Fourment
Verified email at uts.edu.au - Homepage
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Year
BEAST 2.5: An advanced software platform for Bayesian evolutionary analysis
R Bouckaert, TG Vaughan, J Barido-Sottani, S Duchêne, M Fourment, ...
PLoS computational biology 15 (4), e1006650, 2019
28652019
Yersinia pestis and the Plague of Justinian 541–543 AD: a genomic analysis
DM Wagner, J Klunk, M Harbeck, A Devault, N Waglechner, JW Sahl, ...
The Lancet infectious diseases 14 (4), 319-326, 2014
5592014
A random effects branch-site model for detecting episodic diversifying selection
SL Kosakovsky Pond, B Murrell, M Fourment, SDW Frost, W Delport, ...
Molecular biology and evolution 28 (11), 3033-3043, 2011
4632011
Genome-scale rates of evolutionary change in bacteria
S Duchêne, KE Holt, FX Weill, S Le Hello, J Hawkey, DJ Edwards, ...
Microbial genomics 2 (11), e000094, 2016
2522016
PATRISTIC: a program for calculating patristic distances and graphically comparing the components of genetic change
M Fourment, MJ Gibbs
BMC evolutionary biology 6, 1-5, 2006
2432006
A comparison of common programming languages used in bioinformatics
M Fourment, MR Gillings
BMC bioinformatics 9, 1-9, 2008
2152008
The contrasting phylodynamics of human influenza B viruses
D Vijaykrishna, EC Holmes, U Joseph, M Fourment, YCF Su, R Halpin, ...
Elife 4, e05055, 2015
2012015
Eighteenth century Yersinia pestis genomes reveal the long-term persistence of an historical plague focus
KI Bos, A Herbig, J Sahl, N Waglechner, M Fourment, SA Forrest, J Klunk, ...
Elife 5, e12994, 2016
2002016
African apes as reservoirs of Plasmodium falciparum and the origin and diversification of the Laverania subgenus
L Duval, M Fourment, E Nerrienet, D Rousset, SA Sadeuh, SM Goodman, ...
Proceedings of the National Academy of Sciences 107 (23), 10561-10566, 2010
1762010
Influenza A virus migration and persistence in North American wild birds
J Bahl, S Krauss, D Kühnert, M Fourment, G Raven, SP Pryor, LJ Niles, ...
PLoS pathogens 9 (8), e1003570, 2013
1072013
Antigenic and molecular characterization of avian influenza A (H9N2) viruses, Bangladesh
K Shanmuganatham, MM Feeroz, L Jones-Engel, GJD Smith, M Fourment, ...
Emerging infectious diseases 19 (9), 1393, 2013
922013
Genetic evolution of the neuraminidase of influenza A (H3N2) viruses from 1968 to 2009 and its correspondence to haemagglutinin evolution
KB Westgeest, M de Graaf, M Fourment, TM Bestebroer, R van Beek, ...
Journal of general virology 93 (9), 1996-2007, 2012
832012
Chimpanzee Malaria Parasites Related to Plasmodium ovale in Africa
L Duval, E Nerrienet, D Rousset, SA Sadeuh Mba, S Houze, M Fourment, ...
PLoS One 4 (5), e5520, 2009
802009
Accumulating variation at conserved sites in potyvirus genomes is driven by species discovery and affects degenerate primer design
L Zheng, PJ Wayper, AJ Gibbs, M Fourment, BC Rodoni, MJ Gibbs
PLoS One 3 (2), e1586, 2008
782008
Inconsistencies in estimating the age of HIV-1 subtypes due to heterotachy
JO Wertheim, M Fourment, SL Kosakovsky Pond
Molecular biology and evolution 29 (2), 451-456, 2012
712012
The impact of migratory flyways on the spread of avian influenza virus in North America
M Fourment, AE Darling, EC Holmes
BMC evolutionary biology 17, 1-12, 2017
562017
Seqotron: a user-friendly sequence editor for Mac OS X
M Fourment, EC Holmes
BMC research notes 9, 1-4, 2016
462016
The recent establishment of North American H10 lineage influenza viruses in Australian wild waterfowl and the evolution of Australian avian influenza viruses
D Vijaykrishna, YM Deng, YCF Su, M Fourment, P Iannello, GG Arzey, ...
Journal of virology 87 (18), 10182-10189, 2013
452013
19 dubious ways to compute the marginal likelihood of a phylogenetic tree topology
M Fourment, AF Magee, C Whidden, A Bilge, FA Matsen IV, VN Minin
Systematic biology 69 (2), 209-220, 2020
412020
Effective online Bayesian phylogenetics via sequential Monte Carlo with guided proposals
M Fourment, BC Claywell, V Dinh, C McCoy, FA Matsen IV, AE Darling
Systematic biology 67 (3), 490-502, 2018
362018
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