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Serghei Mangul
Serghei Mangul
Assistant Professor at USC
Verified email at usc.edu - Homepage
Title
Cited by
Cited by
Year
Genetic effects on gene expression across human tissues
GTEx Consortium Lead analysts: Aguet François 1 Brown Andrew A. 2 3 4 Castel ...
Nature 550 (7675), 204-213, 2017
33312017
The GTEx Consortium atlas of genetic regulatory effects across human tissues
GTEx Consortium
Science 369 (6509), 1318-1330, 2020
25862020
Dynamic landscape and regulation of RNA editing in mammals
MH Tan, Q Li, R Shanmugam, R Piskol, J Kohler, AN Young, KI Liu, ...
Nature 550 (7675), 249-254, 2017
5372017
Intratumoral CD4+ T cells mediate anti-tumor cytotoxicity in human bladder cancer
DY Oh, SS Kwek, SS Raju, T Li, E McCarthy, E Chow, D Aran, A Ilano, ...
Cell 181 (7), 1612-1625. e13, 2020
5082020
The impact of sex on gene expression across human tissues
M Oliva, M Muñoz-Aguirre, S Kim-Hellmuth, V Wucher, ADH Gewirtz, ...
Science 369 (6509), eaba3066, 2020
4342020
Determinants of telomere length across human tissues
K Demanelis, F Jasmine, LS Chen, M Chernoff, L Tong, D Delgado, ...
Science 369 (6509), eaaz6876, 2020
3232020
A quantitative proteome map of the human body
L Jiang, M Wang, S Lin, R Jian, X Li, J Chan, G Dong, H Fang, ...
Cell 183 (1), 269-283. e19, 2020
2972020
Cell type–specific genetic regulation of gene expression across human tissues
S Kim-Hellmuth, F Aguet, M Oliva, M Muñoz-Aguirre, S Kasela, V Wucher, ...
Science 369 (6509), eaaz8528, 2020
2692020
Estimation of alternative splicing isoform frequencies from RNA-Seq data
M Nicolae, S Mangul, I Măndoiu, A Zelikovsky
Algorithms in Bioinformatics, 202-214, 2010
2562010
Whole-genome sequencing reveals host factors underlying critical COVID-19
A Kousathanas, E Pairo-Castineira, K Rawlik, A Stuckey, CA Odhams, ...
Nature 607 (7917), 97-103, 2022
2352022
Exploiting the GTEx resources to decipher the mechanisms at GWAS loci
AN Barbeira, R Bonazzola, ER Gamazon, Y Liang, YS Park, ...
Genome biology 22, 1-24, 2021
2152021
Critical assessment of metagenome interpretation: the second round of challenges
F Meyer, A Fritz, ZL Deng, D Koslicki, TR Lesker, A Gurevich, G Robertson, ...
Nature methods 19 (4), 429-440, 2022
1992022
Co-expression networks reveal the tissue-specific regulation of transcription and splicing
A Saha, Y Kim, ADH Gewirtz, B Jo, C Gao, IC McDowell, BE Engelhardt, ...
Genome research 27 (11), 1843-1858, 2017
1682017
Inferring viral quasispecies spectra from 454 pyrose-quencing reads
I Astrovskaya, B Tork, S Mangul, K Westbrooks, I Măndoiu, P Balfe, ...
BMC Bioinformatics 12 (Suppl 6), S1, 2011
1532011
Systematic benchmarking of omics computational tools
S Mangul, LS Martin, BL Hill, AKM Lam, MG Distler, A Zelikovsky, E Eskin, ...
Nature communications 10 (1), 1393, 2019
1392019
Population-scale tissue transcriptomics maps long non-coding RNAs to complex disease
OM de Goede, DC Nachun, NM Ferraro, MJ Gloudemans, AS Rao, ...
Cell 184 (10), 2633-2648. e19, 2021
1172021
Transcriptomic signatures across human tissues identify functional rare genetic variation
NM Ferraro, BJ Strober, J Einson, NS Abell, F Aguet, AN Barbeira, ...
Science 369 (6509), eaaz5900, 2020
1172020
Transcriptome analysis in whole blood reveals increased microbial diversity in schizophrenia
LM Olde Loohuis, S Mangul, APS Ori, G Jospin, D Koslicki, HT Yang, ...
Translational psychiatry 8 (1), 96, 2018
113*2018
Technology dictates algorithms: recent developments in read alignment
M Alser, J Rotman, D Deshpande, K Taraszka, H Shi, PI Baykal, HT Yang, ...
Genome biology 22 (1), 249, 2021
1122021
PhenomeXcan: Mapping the genome to the phenome through the transcriptome
M Pividori, PS Rajagopal, A Barbeira, Y Liang, O Melia, L Bastarache, ...
Science advances 6 (37), eaba2083, 2020
972020
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