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Daniel Haft
Daniel Haft
Staff Scientist, National Center for Biotechnology Information, NIH
Verified email at nih.gov
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Year
Reference sequence (RefSeq) database at NCBI: current status, taxonomic expansion, and functional annotation
NA O'Leary, MW Wright, JR Brister, S Ciufo, D Haddad, R McVeigh, ...
Nucleic acids research 44 (D1), D733-D745, 2015
57462015
Genome sequence of the human malaria parasite Plasmodium falciparum
MJ Gardner, N Hall, E Fung, O White, M Berriman, RW Hyman, JM Carlton, ...
Nature 419 (6906), 498-511, 2002
54662002
Evolution and classification of the CRISPR–Cas systems
KS Makarova, DH Haft, R Barrangou, SJJ Brouns, E Charpentier, ...
Nature Reviews Microbiology 9 (6), 467-477, 2011
33932011
An updated evolutionary classification of CRISPR-Cas systems
KS Makarova, YI Wolf, OS Alkhnbashi, F Costa, SA Shah, SJ Saunders, ...
Nature Reviews Microbiology 13 (11), 722-736, 2015
29172015
Genome analysis of multiple pathogenic isolates of Streptococcus agalactiae: implications for the microbial “pan-genome”
H Tettelin, V Masignani, MJ Cieslewicz, C Donati, D Medini, NL Ward, ...
Proceedings of the National Academy of Sciences of the United States of …, 2005
26562005
InterPro: the integrative protein signature database
S Hunter, R Apweiler, TK Attwood, A Bairoch, A Bateman, D Binns, P Bork, ...
Nucleic acids research 37 (suppl 1), D211-D215, 2009
22212009
DNA sequence of both chromosomes of the cholera pathogen Vibrio cholerae
JF Heidelberg, JA Eisen, WC Nelson, RA Clayton, ML Gwinn, RJ Dodson, ...
Nature 406 (6795), 477-483, 2000
21992000
Ribosomally synthesized and post-translationally modified peptide natural products: overview and recommendations for a universal nomenclature
PG Arnison, MJ Bibb, G Bierbaum, AA Bowers, TS Bugni, G Bulaj, ...
Natural product reports 30 (1), 108-160, 2013
20782013
Evidence for lateral gene transfer between Archaea and bacteria from genome sequence of Thermotoga maritima
KE Nelson, RA Clayton, SR Gill, ML Gwinn, RJ Dodson, DH Haft, ...
Nature 399 (6734), 323-329, 1999
18181999
The InterPro protein families and domains database: 20 years on
M Blum, HY Chang, S Chuguransky, T Grego, S Kandasaamy, A Mitchell, ...
Nucleic Acids Research 49 (D1), D344-D354, 2021
17312021
Complete genome sequence of a virulent isolate of Streptococcus pneumoniae
H Tettelin, KE Nelson, IT Paulsen, JA Eisen, TD Read, S Peterson, ...
Science 293 (5529), 498-506, 2001
16772001
Insights on evolution of virulence and resistance from the complete genome analysis of an early methicillin-resistant Staphylococcus aureus strain and a biofilm-producing …
SR Gill, DE Fouts, GL Archer, EF Mongodin, RT DeBoy, J Ravel, ...
Journal of bacteriology 187 (7), 2426-2438, 2005
14412005
A guild of 45 CRISPR-associated (Cas) protein families and multiple CRISPR/Cas subtypes exist in prokaryotic genomes
DH Haft, J Selengut, EF Mongodin, KE Nelson
PLoS Comput Biol 1 (6), e60, 2005
14322005
Complete genome sequence of Neisseria meningitidis serogroup B strain MC58
H Tettelin, NJ Saunders, J Heidelberg, AC Jeffries, KE Nelson, JA Eisen, ...
Science 287 (5459), 1809-1815, 2000
14052000
The InterPro protein families database: the classification resource after 15 years
A Mitchell, HY Chang, L Daugherty, M Fraser, S Hunter, R Lopez, ...
Nucleic acids research 43 (D1), D213-D221, 2014
14012014
The minimum information about a genome sequence (MIGS) specification
D Field, G Garrity, T Gray, N Morrison, J Selengut, P Sterk, T Tatusova, ...
Nature biotechnology 26 (5), 541-547, 2008
13622008
InterPro in 2011: new developments in the family and domain prediction database
S Hunter, P Jones, A Mitchell, R Apweiler, TK Attwood, A Bateman, ...
Nucleic acids research 40 (D1), D306-D312, 2011
12672011
Genome sequence of the radioresistant bacterium Deinococcus radiodurans R1
O White, JA Eisen, JF Heidelberg, EK Hickey, JD Peterson, RJ Dodson, ...
Science 286 (5444), 1571-1577, 1999
12091999
The TIGRFAMs database of protein families
DH Haft, JD Selengut, O White
Nucleic acids research 31 (1), 371-373, 2003
10782003
The complete genome sequence of the Arabidopsis and tomato pathogen Pseudomonas syringae pv. tomato DC3000
CR Buell, V Joardar, M Lindeberg, J Selengut, IT Paulsen, ML Gwinn, ...
Proceedings of the National Academy of Sciences 100 (18), 10181-10186, 2003
10522003
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