Comparison of methods for identification of microbial communities in book collections: Culture-dependent (sequencing and MALDI-TOF MS) and culture-independent (Illumina MiSeq) L Kraková, K Šoltys, A Otlewska, K Pietrzak, S Purkrtová, D Savická, ... International Biodeterioration & Biodegradation 131, 51-59, 2018 | 80 | 2018 |
Recent trends in prenatal genetic screening and testing O Pös, J Budiš, T Szemes F1000Research 8, 2019 | 73 | 2019 |
Utilization of benchtop next generation sequencing platforms ion torrent PGM and MiSeq in noninvasive prenatal testing for chromosome 21 trisomy and testing of impact of in … G Minarik, G Repiska, M Hyblova, E Nagyova, K Soltys, J Budis, F Duris, ... PloS one 10 (12), e0144811, 2015 | 54 | 2015 |
Copy number variation: methods and clinical applications O Pös, J Radvanszky, J Styk, Z Pös, G Buglyó, M Kajsik, J Budis, B Nagy, ... Applied Sciences 11 (2), 819, 2021 | 42 | 2021 |
Technical and methodological aspects of cell-free nucleic acids analyzes Z Pös, O Pös, J Styk, A Mocova, L Strieskova, J Budis, L Kadasi, ... International Journal of Molecular Sciences 21 (22), 8634, 2020 | 39 | 2020 |
Transcription activity of lactic acid bacterial proteolysis-related genes during cheese maturation D Pangallo, L Kraková, A Puškárová, K Šoltys, M Bučková, J Koreňová, ... Food microbiology 82, 416-425, 2019 | 36 | 2019 |
Non-invasive prenatal testing (NIPT) by low coverage genomic sequencing: Detection limits of screened chromosomal microdeletions M Kucharik, A Gnip, M Hyblova, J Budis, L Strieskova, M Harsanyova, ... PLoS One 15 (8), e0238245, 2020 | 31 | 2020 |
Seasonal changes of circulating 25-hydroxyvitamin D correlate with the lower gut microbiome composition in inflammatory bowel disease patients K Soltys, M Stuchlikova, T Hlavaty, B Gaalova, J Budis, J Gazdarica, ... Scientific reports 10 (1), 6024, 2020 | 30 | 2020 |
Strenuous physical training, physical fitness, body composition and bacteroides to prevotella ratio in the gut of elderly athletes K Šoltys, L Lendvorský, I Hric, E Baranovičová, A Penesova, I Mikula, ... Frontiers in physiology 12, 670989, 2021 | 29 | 2021 |
Investigation of bacterial and archaeal communities: novel protocols using modern sequencing by Illumina MiSeq and traditional DGGE-cloning L Kraková, K Šoltys, J Budiš, T Grivalský, F Ďuriš, D Pangallo, T Szemes Extremophiles 20, 795-808, 2016 | 26 | 2016 |
Extracellular DNA correlates with intestinal inflammation in chemically induced colitis in mice M Maronek, B Gromova, R Liptak, B Konecna, M Pastorek, B Cechova, ... Cells 10 (1), 81, 2021 | 24 | 2021 |
Identification of structural variation from NGS-based non-invasive prenatal testing O Pös, J Budis, Z Kubiritova, M Kucharik, F Duris, J Radvanszky, ... International journal of molecular sciences 20 (18), 4403, 2019 | 24 | 2019 |
Co-existence of multiple bacterivorous clevelandellid ciliate species in hindgut of wood-feeding cockroaches in light of their prokaryotic consortium P Vďačný, E Érseková, K Šoltys, J Budiš, L Pecina, I Rurik Scientific Reports 8 (1), 17749, 2018 | 23 | 2018 |
Non-invasive prenatal testing as a valuable source of population specific allelic frequencies J Budis, J Gazdarica, J Radvanszky, M Harsanyova, I Gazdaricova, ... Journal of biotechnology 299, 72-78, 2019 | 20 | 2019 |
Mean and variance of ratios of proportions from categories of a multinomial distribution F Duris, J Gazdarica, I Gazdaricova, L Strieskova, J Budis, J Turna, ... Journal of Statistical Distributions and Applications 5 (1), 1-20, 2018 | 20 | 2018 |
The microbiomes of a XVIII century mummy from the castle of Krásna Hôrka (Slovakia) and its surrounding environment L Kraková, K Šoltys, A Puškárová, M Bučková, L Jeszeová, M Kucharík, ... Environmental microbiology 20 (9), 3294-3308, 2018 | 20 | 2018 |
Comparison of microbial diversity during two different wine fermentation processes M Böhmer, D Smoľak, K Ženišová, Z Čaplová, D Pangallo, A Puškárová, ... FEMS Microbiology Letters 367 (18), fnaa150, 2020 | 18 | 2020 |
Comparative transcriptome analysis of two cucumber cultivars with different sensitivity to cucumber mosaic virus infection Z Šubr, L Predajňa, K Šoltys, B Bokor, J Budiš, M Glasa Pathogens 9 (2), 145, 2020 | 17 | 2020 |
Identification of bacterial and fungal communities in the roots of orchids and surrounding soil in heavy metal contaminated area of mining heaps M Böhmer, D Ozdín, M Račko, M Lichvár, J Budiš, T Szemes Applied Sciences 10 (20), 7367, 2020 | 16 | 2020 |
Combining count- and length-based z-scores leads to improved predictions in non-invasive prenatal testing J Budis, J Gazdarica, J Radvanszky, G Szucs, M Kucharik, L Strieskova, ... Bioinformatics 35 (8), 1284-1291, 2019 | 16 | 2019 |