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Donghan Ma
Donghan Ma
Verified email at purdue.edu
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Year
Analyzing complex single-molecule emission patterns with deep learning
P Zhang, S Liu, A Chaurasia, D Ma, MJ Mlodzianoski, E Culurciello, ...
Nature methods 15 (11), 913-916, 2018
782018
Three-dimensional nanoscopy of whole cells and tissues with in situ point spread function retrieval
F Xu*, D Ma*, KP MacPherson, S Liu, Y Bu, Y Wang, Y Tang, C Bi, T Kwok, ...
Nature Methods 17 (5), 531-540, 2020
722020
Holographic fabrication of an arrayed one-axis scale grating for a two-probe optical linear encoder
X Li, Q Zhou, X Zhu, H Lu, L Yang, D Ma, J Sun, K Ni, X Wang
Optics express 25 (14), 16028-16039, 2017
272017
Fabrication of low-stray-light gratings by broad-beam scanning exposure in the direction perpendicular to the grating grooves
D Ma, L Zeng
Optics Letters 40 (7), 1346-1349, 2015
202015
Achieving unlimited recording length in interference lithography via broad-beam scanning exposure with self-referencing alignment
D Ma, Y Zhao, L Zeng
Scientific Reports 7 (1), 926, 2017
162017
Sub-diffraction error mapping for localisation microscopy images
RJ Marsh, I Costello, MA Gorey, D Ma, F Huang, M Gautel, M Parsons, ...
Nature communications 12 (1), 5611, 2021
142021
A single tyrosine phosphorylation site in cortactin is important for filopodia formation in neuronal growth cones
Y Ren, Y He, S Brown, E Zbornik, MJ Mlodzianoski, D Ma, F Huang, ...
Molecular Biology of the Cell 30 (15), 1817-1833, 2019
122019
Dynein-mediated microtubule translocation powering neurite outgrowth in chick and Aplysia neurons requires microtubule assembly
K McElmurry, JE Stone, D Ma, P Lamoureux, Y Zhang, M Steidemann, ...
Journal of Cell Science 133 (8), jcs232983, 2020
112020
Wavefront aberration of plane diffraction gratings fabricated in a Lloyd’s mirror interferometer
D Ma, S Wang, L Zeng
Journal of Micro/Nanolithography, MEMS, and MOEMS 16 (2), 023503-023503, 2017
92017
Live-cell probe for in situ single-cell monitoring of mitochondrial DNA methylation
H Zhao, D Ma, J Xie, O Sanchez, F Huang, C Yuan
ACS sensors 6 (10), 3575-3586, 2021
72021
Reducing the stray light of holographic gratings by shifting the substrate a short distance in the direction parallel or perpendicular to the exposure interference fringes
D Ma, L Zeng
Chinese Optics Letters 15 (10), 100501, 2017
62017
Deep learning driven adaptive optics for single molecule localization microscopy
P Zhang, D Ma, X Cheng, A Tsai, Y Tang, HC Gao, L Fang, C Bi, ...
Biophysical Journal 122 (3), 430a, 2023
32023
Acute transcriptomic and epigenetic alterations at T12 after rat T10 spinal cord contusive injury
J Xie, S Herr, D Ma, S Wu, H Zhao, S Sun, Z Ma, MY Chan, K Li, Y Yang, ...
Molecular Neurobiology 60 (5), 2937-2953, 2023
12023
Three dimensional nanoscopy of whole cells and tissues with in situ point spread function retrieval
F Xu, D Ma, KP MacPherson, S Liu, Y Bu, Y Wang, C Bi, T Kwok, P Yin, ...
bioRxiv, 727354, 2019
12019
Understanding Complex Single Molecule Emission Patterns with Deep Learning
P Zhang, S Liu, A Chaurasia, D Ma, MJ Mlodzianoski, E Culurciello, ...
Biophysical Journal 116 (3), 281a, 2019
12019
Pinpointing single molecule positions with in situ point spread function retrieval for three dimensional nanoscopy of whole cells and tissues
F Xu, F Huang, D Ma
US Patent 11,960,102, 2024
2024
Observing nanoscale organization of native, cell-surface AMPARs in mouse brain slices as a function of brain region and taupathy
RM Vaidya, DL Nall, J Zhang, Y Lee, D Ma, F Huang, S Kiyonaka, ...
Biophysical Journal 123 (3), 417a, 2024
2024
Multi-color super-resolution imaging of surface AMPAR and phosphotau inside dendritic spines in thick brain slice
Y Lee, RM Vaidya, DL Nall, J Zhang, D Ma, F Huang, S Kiyonaka, ...
Biophysical Journal 123 (3), 417a, 2024
2024
Deep learning driven adaptive optics for single molecule localization microscopy (Conference Presentation)
P Zhang, D Ma, X Cheng, AP Tsai, Y Tang, HC Gao, L Fang, B Cheng, ...
Adaptive Optics and Wavefront Control for Biological Systems IX, PC1238805, 2023
2023
Probing synaptic distribution and arrangement of native surface AMPAR in mouse brain slices with 3D super-resolution microscopy
RM Vaidya, DL Nall, D Ma, F Huang, S Kiyonaka, I Hamachi, HJ Chung, ...
Biophysical journal 122 (3), 417a, 2023
2023
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Articles 1–20