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Tomas Vinar
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Evolutionary and biomedical insights from the rhesus macaque genome
RA Gibbs, J Rogers, MG Katze, R Bumgarner, GM Weinstock, ER Mardis, ...
science 316 (5822), 222-234, 2007
13702007
The sequence and de novo assembly of the giant panda genome
R Li, W Fan, G Tian, H Zhu, L He, J Cai, Q Huang, Q Cai, B Li, Y Bai, ...
Nature 463 (7279), 311-317, 2010
12542010
Comparative and demographic analysis of orang-utan genomes
DP Locke, LDW Hillier, WC Warren, KC Worley, LV Nazareth, DM Muzny, ...
Nature 469 (7331), 529-533, 2011
6242011
Patterns of positive selection in six mammalian genomes
C Kosiol, T Vinař, RR da Fonseca, MJ Hubisz, CD Bustamante, R Nielsen, ...
PLoS genetics 4 (8), e1000144, 2008
5612008
The Schistosoma japonicum genome reveals features of host-parasite interplay
Y Zhou, H Zheng, X Chen, L Zhang, K Wang, J Guo, Z Huang, B Zhang, ...
Nature 460 (7253), 345, 2009
5222009
The western painted turtle genome, a model for the evolution of extreme physiological adaptations in a slowly evolving lineage
H Bradley Shaffer, P Minx, DE Warren, AM Shedlock, RC Thomson, ...
Genome biology 14 (3), 1-23, 2013
3302013
Convergent evolution of the genomes of marine mammals
AD Foote, Y Liu, GWC Thomas, T Vinař, J Alföldi, J Deng, S Dugan, ...
Nature genetics 47 (3), 272-275, 2015
3282015
The genome of the hydatid tapeworm Echinococcus granulosus
H Zheng, W Zhang, L Zhang, Z Zhang, J Li, G Lu, Y Zhu, Y Wang, ...
Nature genetics 45 (10), 1168-1175, 2013
2912013
Genome-culture coevolution promotes rapid divergence of killer whale ecotypes
AD Foote, N Vijay, MC Ávila-Arcos, RW Baird, JW Durban, M Fumagalli, ...
Nature communications 7 (1), 1-12, 2016
1962016
DeepNano: deep recurrent neural networks for base calling in MinION nanopore reads
V Boža, B Brejová, T Vinař
PloS one 12 (6), e0178751, 2017
1892017
The common marmoset genome provides insight into primate biology and evolution
TMG Sequencing, Analysis Consortium
Nature genetics 46 (8), 850, 2014
1602014
The comparative genomics and complex population history of Papio baboons
J Rogers, M Raveendran, RA Harris, T Mailund, K Leppälä, ...
Science Advances 5 (1), eaau6947, 2019
992019
Optimal spaced seeds for homologous coding regions
B BREJOVÁ, DG Brown, T VINAŘ
Journal of Bioinformatics and Computational Biology 1 (04), 595-610, 2004
822004
Evolution of linear chromosomes and multipartite genomes in yeast mitochondria
M Valach, Z Farkas, D Fricova, J Kovac, B Brejova, T Vinar, I Pfeiffer, ...
Nucleic acids research 39 (10), 4202-4219, 2011
762011
Vector seeds: An extension to spaced seeds
B Brejová, DG Brown, T Vinař
Journal of Computer and System Sciences 70 (3), 364-380, 2005
712005
Finding patterns in biological sequences
B Brejová, C DiMarco, T Vinar, SR Hidalgo, G Holguin, C Patten
Unpublished project report for CS798G, University of Waterloo, Fall, 2000
712000
Evolutionary genetics and implications of small size and twinning in callitrichine primates
RA Harris, SD Tardif, T Vinar, DE Wildman, JN Rutherford, J Rogers, ...
Proceedings of the National Academy of Sciences 111 (4), 1467-1472, 2014
682014
ExonHunter: a comprehensive approach to gene finding
B Brejová, DG Brown, M Li, T Vinař
Bioinformatics 21 (suppl_1), i57-i65, 2005
682005
Massive programmed translational jumping in mitochondria
BF Lang, M Jakubkova, E Hegedusova, R Daoud, L Forget, B Brejova, ...
Proceedings of the National Academy of Sciences 111 (16), 5926-5931, 2014
592014
Vector seeds: an extension to spaced seeds allows substantial improvements in sensitivity and specificity
B Brejová, DG Brown, T Vinař
International Workshop on Algorithms in Bioinformatics, 39-54, 2003
562003
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Articles 1–20