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Jeffrey Varner
Jeffrey Varner
Professor of Chemical and Biomolecular Engineering, Cornell University
Verified email at cornell.edu - Homepage
Title
Cited by
Cited by
Year
A review of the mammalian unfolded protein response
A Chakrabarti, AW Chen, JD Varner
Biotechnology and bioengineering 108 (12), 2777-2793, 2011
5672011
Engineering the spatial organization of metabolic enzymes: mimicking nature's synergy
RJ Conrado, JD Varner, MP DeLisa
Current opinion in biotechnology 19 (5), 492-499, 2008
4062008
A mathematical model of caspase function in apoptosis
M Fussenegger, JE Bailey, J Varner
Nature biotechnology 18 (7), 768-774, 2000
3352000
Computationally derived points of fragility of a human cascade are consistent with current therapeutic strategies
D Luan, M Zai, JD Varner
PLoS computational biology 3 (7), e142, 2007
1342007
Metabolic engineering from a cybernetic perspective. 1. Theoretical preliminaries
J Varner, D Ramkrishna
Biotechnology Progress 15 (3), 407-425, 1999
1301999
A hybrid model of anaerobic E. coli GJT001: Combination of elementary flux modes and cybernetic variables
JI Kim, JD Varner, D Ramkrishna
Biotechnology progress 24 (5), 993-1006, 2008
1052008
Model identification of signal transduction networks from data using a state regulator problem
KG Gadkar, J Varner, FJ Doyle III
Systems Biology 2 (1), 17-30, 2005
1042005
Mathematical models of metabolic pathways
J Varner, D Ramkrishna
Current opinion in Biotechnology 10 (2), 146-150, 1999
891999
Physicochemical regulation of endothelial sprouting in a 3D microfluidic angiogenesis model
SS Verbridge, A Chakrabarti, P DelNero, B Kwee, JD Varner, AD Stroock, ...
Journal of biomedical materials research Part A 101 (10), 2948-2956, 2013
862013
Ubiquibodies, synthetic E3 ubiquitin ligases endowed with unnatural substrate specificity for targeted protein silencing
AD Portnoff, EA Stephens, JD Varner, MP DeLisa
Journal of Biological Chemistry 289 (11), 7844-7855, 2014
822014
Cybernetic model predictive control of a continuous bioreactor with cell recycle
KG Gadkar, FJD III, TJ Crowley, JD Varner
Biotechnology progress 19 (5), 1487-1497, 2003
742003
A mixed integer linear programming (MILP) framework for inferring time delay in gene regulatory networks
MS Dasika, A Gupta, CD Maranas
Biocomputing 2004, 474-485, 2003
722003
Large‐scale prediction of phenotype: Concept
JD Varner
Biotechnology and bioengineering 69 (6), 664-678, 2000
722000
Generating effective models and parameters for RNA genetic circuits
JBL C. Y. Hu, J. D. Varner
ACS Synthetic Biology 4 (8), 914–926, 2015
562015
Multiscale models of breast cancer progression
A Chakrabarti, S Verbridge, AD Stroock, C Fischbach, JD Varner
Annals of biomedical engineering 40, 2488-2500, 2012
552012
An effective model of the retinoic acid induced HL-60 differentiation program
R Tasseff, HA Jensen, J Congleton, D Dai, KV Rogers, A Sagar, ...
Scientific reports 7 (1), 14327, 2017
542017
Metabolic engineering from a cybernetic perspective: aspartate family of amino acids
J Varner, D Ramkrishna
Metabolic engineering 1 (1), 88-116, 1999
501999
Application of cybernetic models to metabolic engineering: Investigation of storage pathways
J Varner, D Ramkrishna
Biotechnology and bioengineering 58 (2‐3), 282-291, 1998
491998
Sequence Specific Modeling of E. coli Cell-Free Protein Synthesis
M Vilkhovoy, N Horvath, CH Shih, JA Wayman, K Calhoun, J Swartz, ...
ACS synthetic biology 7 (8), 1844-1857, 2018
462018
Stochastic reaction–diffusion simulation of enzyme compartmentalization reveals improved catalytic efficiency for a synthetic metabolic pathway
RJ Conrado, TJ Mansell, JD Varner, MP DeLisa
Metabolic engineering 9 (4), 355-363, 2007
462007
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