| A review of the mammalian unfolded protein response A Chakrabarti, AW Chen, JD Varner Biotechnology and bioengineering 108 (12), 2777-2793, 2011 | 571 | 2011 |
| Engineering the spatial organization of metabolic enzymes: mimicking nature's synergy RJ Conrado, JD Varner, MP DeLisa Current opinion in biotechnology 19 (5), 492-499, 2008 | 411 | 2008 |
| A mathematical model of caspase function in apoptosis M Fussenegger, JE Bailey, J Varner Nature biotechnology 18 (7), 768-774, 2000 | 336 | 2000 |
| Computationally derived points of fragility of a human cascade are consistent with current therapeutic strategies D Luan, M Zai, JD Varner PLoS computational biology 3 (7), e142, 2007 | 133 | 2007 |
| Metabolic engineering from a cybernetic perspective. 1. Theoretical preliminaries J Varner, D Ramkrishna Biotechnology Progress 15 (3), 407-425, 1999 | 129 | 1999 |
| A hybrid model of anaerobic E. coli GJT001: Combination of elementary flux modes and cybernetic variables JI Kim, JD Varner, D Ramkrishna Biotechnology progress 24 (5), 993-1006, 2008 | 104 | 2008 |
| Model identification of signal transduction networks from data using a state regulator problem KG Gadkar, J Varner, FJ Doyle III Systems Biology 2 (1), 17-30, 2005 | 102 | 2005 |
| Mathematical models of metabolic pathways J Varner, D Ramkrishna Current opinion in Biotechnology 10 (2), 146-150, 1999 | 91 | 1999 |
| Physicochemical regulation of endothelial sprouting in a 3D microfluidic angiogenesis model SS Verbridge, A Chakrabarti, P DelNero, B Kwee, JD Varner, AD Stroock, ... Journal of biomedical materials research Part A 101 (10), 2948-2956, 2013 | 89 | 2013 |
| Ubiquibodies, synthetic E3 ubiquitin ligases endowed with unnatural substrate specificity for targeted protein silencing AD Portnoff, EA Stephens, JD Varner, MP DeLisa Journal of Biological Chemistry 289 (11), 7844-7855, 2014 | 87 | 2014 |
| Cybernetic model predictive control of a continuous bioreactor with cell recycle KG Gadkar, FJD III, TJ Crowley, JD Varner Biotechnology progress 19 (5), 1487-1497, 2003 | 74 | 2003 |
| Large‐scale prediction of phenotype: Concept JD Varner Biotechnology and bioengineering 69 (6), 664-678, 2000 | 73 | 2000 |
| A mixed integer linear programming (MILP) framework for inferring time delay in gene regulatory networks MS Dasika, A Gupta, CD Maranas Biocomputing 2004, 474-485, 2003 | 72 | 2003 |
| Generating effective models and parameters for RNA genetic circuits JBL C. Y. Hu, J. D. Varner ACS Synthetic Biology 4 (8), 914–926, 2015 | 58 | 2015 |
| Multiscale models of breast cancer progression A Chakrabarti, S Verbridge, AD Stroock, C Fischbach, JD Varner Annals of biomedical engineering 40, 2488-2500, 2012 | 57 | 2012 |
| An effective model of the retinoic acid induced HL-60 differentiation program R Tasseff, HA Jensen, J Congleton, D Dai, KV Rogers, A Sagar, ... Scientific reports 7 (1), 14327, 2017 | 56 | 2017 |
| Metabolic engineering from a cybernetic perspective: aspartate family of amino acids J Varner, D Ramkrishna Metabolic engineering 1 (1), 88-116, 1999 | 50 | 1999 |
| Application of cybernetic models to metabolic engineering: Investigation of storage pathways J Varner, D Ramkrishna Biotechnology and bioengineering 58 (2‐3), 282-291, 1998 | 49 | 1998 |
| Sequence Specific Modeling of E. coli Cell-Free Protein Synthesis M Vilkhovoy, N Horvath, CH Shih, JA Wayman, K Calhoun, J Swartz, ... ACS synthetic biology 7 (8), 1844-1857, 2018 | 47 | 2018 |
| Stochastic reaction–diffusion simulation of enzyme compartmentalization reveals improved catalytic efficiency for a synthetic metabolic pathway RJ Conrado, TJ Mansell, JD Varner, MP DeLisa Metabolic engineering 9 (4), 355-363, 2007 | 46 | 2007 |
Anirikh ChakrabartiMicrobiome Program Lead, Cargill R&DVerified email at cargill.com
