Gergely J, Szöllősi

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Vincent DaubincnrsVerified email at univ-lyon1.fr
Bastien BoussauLBBE, UMR 5558, CNRS researcher, Université de LyonVerified email at univ-lyon1.fr
Tom A. WilliamsAssociate Professor in Molecular Evolution, University of BristolVerified email at bristol.ac.uk
Eric TannierInria, IXXI, ENS Lyon, Univ LyonVerified email at inria.fr
Adrián A. DavínPostdoctoral fellowVerified email at uq.edu.au
Imre DerenyiDepartment of Biological Physics, Eotvos University, HungaryVerified email at elte.hu
Anja SpangResearch Leader at Royal Netherlands Institute for Sea Research (NIOZ), MMBVerified email at nioz.nl
Dominik SchrempfDept. Biological Physics, Eötvös Loránd University, Budapest, HungaryVerified email at caesar.elte.hu
Peter G. FosterNatural History Museum, LondonVerified email at nhm.ac.uk
Martin EmbleyProfessor of Molecular Evolution, Newcastle UniversityVerified email at ncl.ac.uk
Celine ScornavaccaInstitut des Sciences de l'Evolution, MontpellierVerified email at umontpellier.fr
Lénárd L. SzánthóEötvös University, ELTEVerified email at ttk.elte.hu
Manolo GouyLaboratory of Biometry and Evolutionary Biology, CNRS, LyonVerified email at univ-lyon1.fr
Benoit MorelHeidelberg Institute of Theoretical StudiesVerified email at h-its.org
Alexandros StamatakisFoundation for Research and Technology - Hellas, HITS gGmbH, KITVerified email at ics.forth.gr
Philip HugenholtzAustralian Centre for Ecogenomics, SCMB, The University of QueenslandVerified email at uq.edu.au
Tara A. MahendrarajahRoyal Netherlands Institute for Sea ResearchVerified email at nioz.nl
David SelmecziSoftware developer, Semilab, BudapestVerified email at semilab.hu
Philip C. J. DonoghueProfessor of Palaeobiology, University of Bristol, School of Earth SciencesVerified email at bristol.ac.uk
Cymon J. CoxCentro de Ciencias do Mar, Faro, PortugalVerified email at ualg.pt

Gergely J, Szöllősi

Other namesGJ, Szöllősi, GJ, Szollosi, Gergely J, Szollosi

Okinawa Institute of Science and Technology, OIST, Eötvös University, ELTE, HUN-REN ÖK ETI

Verified email at oist.jp - Homepage

tree of life somatic evolution evolutionary biology bioinformatics theoretical biology


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Phase transition in the collective migration of tissue cells: experiment and model B Szabo, GJ Szöllösi, B Gönci, Z Jurányi, D Selmeczi, T Vicsek Physical Review E—Statistical, Nonlinear, and Soft Matter Physics 74 (6 …, 2006	574	2006
Damage and fluctuations induce loops in optimal transport networks E Katifori, GJ Szöllősi, MO Magnasco Physical review letters 104 (4), 048704, 2010	396	2010
A rooted phylogeny resolves early bacterial evolution GA Coleman, AA Davín, TA Mahendrarajah, LL Szánthó, A Spang, ... Science 372 (6542), eabe0511, 2021	371*	2021
Large-scale genome sequencing of mycorrhizal fungi provides insights into the early evolution of symbiotic traits S Miyauchi, E Kiss, A Kuo, E Drula, A Kohler, M Sánchez-García, E Morin, ... Nature communications 11 (1), 5125, 2020	324	2020
Genome-scale coestimation of species and gene trees B Boussau, GJ Szöllősi, L Duret, M Gouy, E Tannier, V Daubin Genome research 23 (2), 323-330, 2013	303	2013
The inference of gene trees with species trees GJ Szöllősi, E Tannier, V Daubin, B Boussau Systematic biology 64 (1), e42-e62, 2015	280	2015
Megaphylogeny resolves global patterns of mushroom evolution T Varga, K Krizsán, C Földi, B Dima, M Sánchez-García, ... Nature ecology & evolution 3 (4), 668-678, 2019	249	2019
Integrative modeling of gene and genome evolution roots the archaeal tree of life TA Williams, GJ Szöllősi, A Spang, PG Foster, SE Heaps, B Boussau, ... Proceedings of the National Academy of Sciences 114 (23), E4602-E4611, 2017	236	2017
Efficient exploration of the space of reconciled gene trees GJ Szöllősi, W Rosikiewicz, B Boussau, E Tannier, V Daubin Systematic biology 62 (6), 901-912, 2013	209	2013
An efficient algorithm for gene/species trees parsimonious reconciliation with losses, duplications and transfers JP Doyon, C Scornavacca, KY Gorbunov, GJ Szöllősi, V Ranwez, V Berry Comparative Genomics: International Workshop, RECOMB-CG 2010, Ottawa, Canada …, 2010	193	2010
Phylogenetic modeling of lateral gene transfer reconstructs the pattern and relative timing of speciations GJ Szöllősi, B Boussau, SS Abby, E Tannier, V Daubin Proceedings of the national academy of sciences 109 (43), 17513-17518, 2012	192	2012
Horizontal gene transfer and the history of life V Daubin, GJ Szöllősi Cold Spring Harbor perspectives in biology 8 (4), a018036, 2016	149	2016
Lateral gene transfer from the dead GJ Szöllősi, E Tannier, N Lartillot, V Daubin Systematic biology 62 (3), 386-397, 2013	133	2013
Emergent neutrality in adaptive asexual evolution S Schiffels, GJ Szöllősi, V Mustonen, M Lässig Genetics 189 (4), 1361-1375, 2011	129	2011
GeneRax: a tool for species-tree-aware maximum likelihood-based gene family tree inference under gene duplication, transfer, and loss B Morel, AM Kozlov, A Stamatakis, GJ Szöllősi Molecular biology and evolution 37 (9), 2763-2774, 2020	112	2020
ecceTERA: comprehensive gene tree-species tree reconciliation using parsimony E Jacox, C Chauve, GJ Szöllősi, Y Ponty, C Scornavacca Bioinformatics 32 (13), 2056-2058, 2016	109	2016
How Long Does Wolbachia Remain on Board? M Bailly-Bechet, P Martins-Simões, GJ Szöllősi, G Mialdea, MF Sagot, ... Molecular Biology and Evolution 34 (5), 1183-1193, 2017	97	2017
Genome-scale phylogenetic analysis finds extensive gene transfer among fungi GJ Szöllősi, AA Davín, E Tannier, V Daubin, B Boussau Philosophical Transactions of the Royal Society B: Biological Sciences 370 …, 2015	97	2015
Divergent evolutionary trajectories of bryophytes and tracheophytes from a complex common ancestor of land plants BJ Harris, JW Clark, D Schrempf, GJ Szöllősi, PCJ Donoghue, ... Nature Ecology & Evolution 6 (11), 1634-1643, 2022	94	2022
Gene transfers can date the tree of life AA Davín, E Tannier, TA Williams, B Boussau, V Daubin, GJ Szöllősi Nature ecology & evolution 2 (5), 904-909, 2018	65	2018

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