| The COG database: an updated version includes eukaryotes RL Tatusov, ND Fedorova, JD Jackson, AR Jacobs, B Kiryutin, EV Koonin, ... BMC bioinformatics 4, 1-14, 2003 | 4949 | 2003 |
| The COG database: new developments in phylogenetic classification of proteins from complete genomes RL Tatusov, DA Natale, IV Garkavtsev, TA Tatusova, UT Shankavaram, ... Nucleic acids research 29 (1), 22-28, 2001 | 2278 | 2001 |
| Genomic sequence of the pathogenic and allergenic filamentous fungus Aspergillus fumigatus WC Nierman, A Pain, MJ Anderson, JR Wortman, HS Kim, J Arroyo, ... Nature 438 (7071), 1151-1156, 2005 | 1668 | 2005 |
| Genome sequencing and analysis of Aspergillus oryzae M Machida, K Asai, M Sano, T Tanaka, T Kumagai, G Terai, KI Kusumoto, ... Nature 438 (7071), 1157-1161, 2005 | 1486 | 2005 |
| A comprehensive evolutionary classification of proteins encoded in complete eukaryotic genomes EV Koonin, ND Fedorova, JD Jackson, AR Jacobs, DM Krylov, ... Genome biology 5, 1-28, 2004 | 1023 | 2004 |
| CDD: a curated Entrez database of conserved domain alignments A Marchler-Bauer, JB Anderson, C DeWeese-Scott, ND Fedorova, ... Nucleic acids research 31 (1), 383-387, 2003 | 906 | 2003 |
| SMURF: genomic mapping of fungal secondary metabolite clusters N Khaldi, FT Seifuddin, G Turner, D Haft, WC Nierman, KH Wolfe, ... Fungal Genetics and Biology 47 (9), 736-741, 2010 | 828 | 2010 |
| Genomic Islands in the Pathogenic Filamentous Fungus Aspergillus fumigatus ND Fedorova, N Khaldi, VS Joardar, R Maiti, P Amedeo, MJ Anderson, ... PLoS genetics 4 (4), e1000046, 2008 | 580 | 2008 |
| Genome sequencing and analysis of the filamentous fungus Penicillium chrysogenum MA Van Den Berg, R Albang, K Albermann, JH Badger, JM Daran, ... Nature biotechnology 26 (10), 1161-1168, 2008 | 528 | 2008 |
| Transcriptional regulation of chemical diversity in Aspergillus fumigatus by LaeA RM Perrin, ND Fedorova, JW Bok, RA Cramer Jr, JR Wortman, HS Kim, ... PLoS pathogens 3 (4), e50, 2007 | 425 | 2007 |
| Sodium ion cycle in bacterial pathogens: evidence from cross-genome comparisons CC Häse, ND Fedorova, MY Galperin, PA Dibrov Microbiology and Molecular Biology Reviews 65 (3), 353-370, 2001 | 290 | 2001 |
| Sub-telomere directed gene expression during initiation of invasive aspergillosis A McDonagh, ND Fedorova, J Crabtree, Y Yu, S Kim, D Chen, O Loss, ... PLoS pathogens 4 (9), e1000154, 2008 | 275 | 2008 |
| MMDB: Entrez's 3D-structure database J Chen, JB Anderson, C DeWeese-Scott, ND Fedorova, LY Geer, S He, ... Nucleic Acids Research 31 (1), 474-477, 2003 | 223 | 2003 |
| Beyond aflatoxin: four distinct expression patterns and functional roles associated with Aspergillus flavus secondary metabolism gene clusters DR Georgianna, ND Fedorova, JL Burroughs, AL Dolezal, JW Bok, ... Molecular plant pathology 11 (2), 213-226, 2010 | 194 | 2010 |
| Systematic and searchable classification of cytochrome P450 proteins encoded by fungal and oomycete genomes V Moktali, J Park, ND Fedorova-Abrams, B Park, J Choi, YH Lee, S Kang BMC genomics 13, 1-13, 2012 | 167 | 2012 |
| The pH-Responsive PacC Transcription Factor of Aspergillus fumigatus Governs Epithelial Entry and Tissue Invasion during Pulmonary Aspergillosis M Bertuzzi, M Schrettl, L Alcazar-Fuoli, TC Cairns, A Munoz, LA Walker, ... PLoS pathogens 10 (10), e1004413, 2014 | 161 | 2014 |
| Tight control of mycotoxin biosynthesis gene expression in Aspergillus flavus by temperature as revealed by RNA-Seq J Yu, ND Fedorova, BG Montalbano, D Bhatnagar, TE Cleveland, ... FEMS microbiology letters 322 (2), 145-149, 2011 | 154 | 2011 |
| Comparative analysis of programmed cell death pathways in filamentous fungi ND Fedorova, JH Badger, GD Robson, JR Wortman, WC Nierman BMC genomics 6, 1-14, 2005 | 146 | 2005 |
| Potential of Aspergillus flavus genomics for applications in biotechnology TE Cleveland, J Yu, N Fedorova, D Bhatnagar, GA Payne, WC Nierman, ... Trends in biotechnology 27 (3), 151-157, 2009 | 140 | 2009 |
| Continuing Evolution of Burkholderia mallei Through Genome Reduction and Large-Scale Rearrangements L Losada, CM Ronning, D DeShazer, D Woods, N Fedorova, ... Genome biology and evolution 2, 102-116, 2010 | 132 | 2010 |
Eugene KooninSenior Investigator, NCBI, NIHVerified email at ncbi.nlm.nih.gov
