| Evaluating the effects of SARS-CoV-2 spike mutation D614G on transmissibility and pathogenicity E Volz, V Hill, JT McCrone, A Price, D Jorgensen, Á O’Toole, J Southgate, ... Cell 184 (1), 64-75. e11, 2021 | 948 | 2021 |
| Hospital admission and emergency care attendance risk for SARS-CoV-2 delta (B. 1.617. 2) compared with alpha (B. 1.1. 7) variants of concern: a cohort study KA Twohig, T Nyberg, A Zaidi, S Thelwall, MA Sinnathamby, S Aliabadi, ... The Lancet Infectious Diseases 22 (1), 35-42, 2022 | 614 | 2022 |
| Recurrent emergence of SARS-CoV-2 spike deletion H69/V70 and its role in the Alpha variant B. 1.1. 7 B Meng, SA Kemp, G Papa, R Datir, IATM Ferreira, S Marelli, WT Harvey, ... Cell reports 35 (13), 109292, 2021 | 336 | 2021 |
| Changes in symptomatology, reinfection, and transmissibility associated with the SARS-CoV-2 variant B. 1.1. 7: an ecological study MS Graham, CH Sudre, A May, M Antonelli, B Murray, T Varsavsky, ... The Lancet Public Health 6 (5), e335-e345, 2021 | 299 | 2021 |
| Clinical and biological insights from viral genome sequencing CJ Houldcroft, MA Beale, J Breuer Nature Reviews Microbiology 15 (3), 183-192, 2017 | 250 | 2017 |
| Genomic context of azole resistance mutations in Aspergillus fumigatus determined using whole-genome sequencing A Abdolrasouli, J Rhodes, MA Beale, F Hagen, TR Rogers, A Chowdhary, ... MBio 6 (3), e00536-15, 2015 | 173 | 2015 |
| Efficient phagocytosis and laccase activity affect the outcome of HIV-associated cryptococcosis W Sabiiti, E Robertson, MA Beale, SA Johnston, AE Brouwer, A Loyse, ... The Journal of clinical investigation 124 (5), 2000-2008, 2014 | 140 | 2014 |
| Is there evidence of recent hepatitis E virus infection in English and North Welsh blood donors? MA Beale, K Tettmar, R Szypulska, RS Tedder, S Ijaz Vox sanguinis 100 (3), 340-342, 2011 | 117 | 2011 |
| Genotypic diversity is associated with clinical outcome and phenotype in cryptococcal meningitis across Southern Africa MA Beale, W Sabiiti, EJ Robertson, KM Fuentes-Cabrejo, SJ O’Hanlon, ... PLoS neglected tropical diseases 9 (6), e0003847, 2015 | 101 | 2015 |
| Tracing Genetic Exchange and Biogeography of Cryptococcus neoformans var. grubii at the Global Population Level J Rhodes, CA Desjardins, SM Sykes, MA Beale, M Vanhove, ... Genetics 207 (1), 327-346, 2017 | 91 | 2017 |
| Exponential growth, high prevalence of SARS-CoV-2, and vaccine effectiveness associated with the Delta variant P Elliott, D Haw, H Wang, O Eales, CE Walters, KEC Ainslie, C Atchison, ... Science 374 (6574), eabl9551, 2021 | 88 | 2021 |
| A population genomics approach to assessing the genetic basis of within-host microevolution underlying recurrent cryptococcal meningitis infection J Rhodes, MA Beale, M Vanhove, JN Jarvis, S Kannambath, JA Simpson, ... G3: Genes, Genomes, Genetics 7 (4), 1165-1176, 2017 | 80 | 2017 |
| Genomic epidemiology of syphilis reveals independent emergence of macrolide resistance across multiple circulating lineages MA Beale, M Marks, SK Sahi, LC Tantalo, AV Nori, P French, SA Lukehart, ... Nature communications 10 (1), 3255, 2019 | 72 | 2019 |
| Illuminating Choices for Library Prep: A Comparison of Library Preparation Methods for Whole Genome Sequencing of Cryptococcus neoformans Using Illumina HiSeq J Rhodes, MA Beale, MC Fisher PloS one 9 (11), e113501, 2014 | 57 | 2014 |
| Genomic epidemiology of Cryptococcus yeasts identifies adaptation to environmental niches underpinning infection across an African HIV/AIDS cohort M Vanhove, MA Beale, J Rhodes, D Chanda, S Lakhi, G Kwenda, ... Molecular ecology 26 (7), 1991-2005, 2017 | 56 | 2017 |
| The global epidemiology of emerging Histoplasma species in recent years AM Rodrigues, MA Beale, F Hagen, MC Fisher, PPD Terra, S de Hoog, ... Studies in mycology 97 (1), 100095-100095, 2020 | 46 | 2020 |
| On the effective depth of viral sequence data CJR Illingworth, S Roy, MA Beale, H Tutill, R Williams, J Breuer Virus Evolution 3 (2), vex030, 2017 | 38 | 2017 |
| Global phylogeny of Treponema pallidum lineages reveals recent expansion and spread of contemporary syphilis MA Beale, M Marks, MJ Cole, MK Lee, R Pitt, C Ruis, E Balla, T Crucitti, ... Nature microbiology 6 (12), 1549-1560, 2021 | 36* | 2021 |
| Genomic epidemiology of COVID-19 in care homes in the east of England WL Hamilton, G Tonkin-Hill, ER Smith, D Aggarwal, CJ Houldcroft, ... Elife 10, e64618, 2021 | 24* | 2021 |
| Combined epidemiological and genomic analysis of nosocomial SARS-CoV-2 infection early in the pandemic and the role of unidentified cases in transmission LB Snell, CL Fisher, U Taj, O Stirrup, B Merrick, A Alcolea-Medina, ... Clinical Microbiology and Infection 28 (1), 93-100, 2022 | 21 | 2022 |
Matthew C FisherProfessor of Fungal Disease Epidemiology, Imperial College LondonVerified email at imperial.ac.uk
