Spatially aware dimension reduction for spatial transcriptomics L Shang, X Zhou Nature communications 13 (1), 7203, 2022 | 108 | 2022 |
Genetic architecture of gene expression in European and African Americans: an eQTL mapping study in GENOA L Shang, JA Smith, W Zhao, M Kho, ST Turner, TH Mosley, SLR Kardia, ... The American Journal of Human Genetics 106 (4), 496-512, 2020 | 68 | 2020 |
SRTsim: spatial pattern preserving simulations for spatially resolved transcriptomics J Zhu, L Shang, X Zhou Genome biology 24 (1), 39, 2023 | 32 | 2023 |
Spatial transcriptomics AC Anderson, I Yanai, LR Yates, L Wang, A Swarbrick, P Sorger, ... Cancer Cell 40 (9), 895-900, 2022 | 31 | 2022 |
Leveraging gene co-expression patterns to infer trait-relevant tissues in genome-wide association studies L Shang, JA Smith, X Zhou PLoS genetics 16 (4), e1008734, 2020 | 27 | 2020 |
METRO: Multi-ancestry transcriptome-wide association studies for powerful gene-trait association detection Z Li, W Zhao, L Shang, TH Mosley, SLR Kardia, JA Smith, X Zhou The American Journal of Human Genetics 109 (5), 783-801, 2022 | 18 | 2022 |
Epigenome-wide association study identifies DNA methylation sites associated with target organ damage in older African Americans F Ammous, W Zhao, SM Ratliff, M Kho, L Shang, AC Jones, ... Epigenetics 16 (8), 862-875, 2021 | 15 | 2021 |
Epigenetic loci for blood pressure are associated with hypertensive target organ damage in older African Americans from the genetic epidemiology network of Arteriopathy (GENOA … M Kho, W Zhao, SM Ratliff, F Ammous, TH Mosley, L Shang, SLR Kardia, ... BMC medical genomics 13, 1-10, 2020 | 15 | 2020 |
meQTL mapping in the GENOA study reveals genetic determinants of DNA methylation in African Americans L Shang, W Zhao, YZ Wang, Z Li, JJ Choi, M Kho, TH Mosley, SLR Kardia, ... Nature communications 14 (1), 2711, 2023 | 14 | 2023 |
Transcriptome-wide association study of blood cell traits in african ancestry and hispanic/latino populations J Wen, M Xie, B Rowland, JD Rosen, Q Sun, J Chen, AL Tapia, H Qian, ... Genes 12 (7), 1049, 2021 | 14 | 2021 |
A review of statistical methods for identifying trait-relevant tissues and cell types H Zhu, L Shang, X Zhou Frontiers in Genetics 11, 587887, 2021 | 12 | 2021 |
Ranking cancer proteins by integrating PPI network and protein expression profiles J Ren, L Shang, Q Wang, J Li BioMed research international 2019 (1), 3907195, 2019 | 11 | 2019 |
DNA methylation mediates the association between individual and neighborhood social disadvantage and cardiovascular risk factors YZ Wang, W Zhao, F Ammous, Y Song, J Du, L Shang, SM Ratliff, ... Frontiers in cardiovascular medicine 9, 848768, 2022 | 9 | 2022 |
Pinpointing miRNA and genes enrichment over trait-relevant tissue network in Genome-Wide Association Studies B Li, J Dong, J Yu, Y Fan, L Shang, X Zhou, Y Bai BMC medical genomics 13, 1-13, 2020 | 8 | 2020 |
Genome-wide association meta-analysis of individuals of european ancestry identifies suggestive loci for sodium intake, potassium intake, and their ratio measured from 24-hour … M Kho, JA Smith, N Verweij, L Shang, KA Ryan, W Zhao, EB Ware, ... The Journal of Nutrition 150 (10), 2635-2645, 2020 | 6 | 2020 |
Identification of functionally important miRNA targeted genes associated with child obesity trait in genome-wide association studies M Song, J Yu, B Li, J Dong, J Gao, L Shang, X Zhou, Y Bai BMC genomics 23 (Suppl 4), 360, 2022 | 3 | 2022 |
Multi-ancestry transcriptome-wide association studies of cognitive function, white matter hyperintensity, and Alzheimer’s disease DL Chaar, Z Li, L Shang, SM Ratliff, TH Mosley, SLR Kardia, W Zhao, ... medRxiv, 2024.01. 03.24300768, 2024 | | 2024 |
Identification of Key Biomarkers Associated with Ductal Breast Cancer in Spatial Transcriptomics Data E Xi, L Shang, T Hu, X Zhou, C Yu, Y Bai 2023 IEEE International Conference on Bioinformatics and Biomedicine (BIBM …, 2023 | | 2023 |
Statistical Methods and Computational Tools for Genetics and Genomics Data L Shang | | 2023 |