Arnau Sebé-Pedrós

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Iñaki Ruiz-TrilloICREA research professor at Institut de Biologia Evolutiva (CSIC-UPF)Verified email at ibe.upf-csic.es
Xavier Grau-BovéCentre de Regulació GenòmicaVerified email at crg.cat
Alex de MendozaSenior Lecturer, Queen Mary University of London, School of Biological and Behavioural SciencesVerified email at qmul.ac.uk
Amos TanayWeizmann InstituteVerified email at weizmann.ac.il
B. Franz LangCentre Robert Cedergren, Biochimie, Universite de MontrealVerified email at umontreal.ca
Anamaria ElekBioinformatician, Centre de Regulació GenòmicaVerified email at crg.eu
CRISTINA CHIVA RODRIGUEZUniversitat Pompeu FabraVerified email at upf.edu
Aviezer LifshitzWeizmann Institute of ScienceVerified email at weizmann.ac.il
Andrew RogerProfessor of Biochemistry and Molecular Biology, Dalhousie UnviersityVerified email at dal.ca
Baptiste SaudemontResearch Engineer at PasteurVerified email at pasteur.fr
Yann Loe-MieInstitut PasteurVerified email at pasteur.fr
Jose Luis Gomez-SkarmetaCentro Andaluz de Biología del DesarrolloVerified email at upo.es
Manuel IrimiaCentre for Genomic RegulationVerified email at crg.eu
Shani LevyPost-Doc, Centre for Genomic Regulation (CRG), BarcelonaVerified email at crg.eu
Nicole KingInvestigator, HHMI and Professor, MCB, University of California, BerkeleyVerified email at berkeley.edu
Matthew W. BrownDonald L Hall Professor in Biology, Professor, Department of Biological SciencesVerified email at msstate.edu
Andreas HejnolDirector of the Institute of Zoology and Evolutionary Research, Friedrich Schiller University JenaVerified email at uni-jena.de
Purificacion Lopez-GarciaCNRS & Université Paris-SaclayVerified email at universite-paris-saclay.fr
Marta IglesiasCRGVerified email at crg.es
Tali MassMarine Biology Department, The Leon H. Charney School of Marine Sciences, University of HaifaVerified email at univ.haifa.ac.il

Arnau Sebé-Pedrós

ICREA Research Professor CRG; Associate Faculty Wellcome Sanger Institute

Verified email at crg.eu - Homepage

Evolutionary Biology Comparative genomics Epigenomics Gene regulation Chromatin


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Cnidarian cell type diversity and regulation revealed by whole-organism single-cell RNA-Seq A Sebé-Pedrós, B Saudemont, E Chomsky, F Plessier, MP Mailhé, ... Cell 173 (6), 1520-1534. e20, 2018	319	2018
The Capsaspora genome reveals a complex unicellular prehistory of animals H Suga, Z Chen, A De Mendoza, A Sebé-Pedrós, MW Brown, E Kramer, ... Nature communications 4 (1), 2325, 2013	319	2013
The origin of Metazoa: a unicellular perspective A Sebé-Pedrós, BM Degnan, I Ruiz-Trillo Nature Reviews Genetics 18 (8), 498-512, 2017	304	2017
MetaCell: analysis of single-cell RNA-seq data using K-nn graph partitions Y Baran, A Bercovich, A Sebe-Pedros, Y Lubling, A Giladi, E Chomsky, ... Genome biology 20, 1-19, 2019	282	2019
Early metazoan cell type diversity and the evolution of multicellular gene regulation A Sebé-Pedrós, E Chomsky, K Pang, D Lara-Astiaso, F Gaiti, Z Mukamel, ... Nature ecology & evolution 2 (7), 1176-1188, 2018	272	2018
Ancient origin of the integrin-mediated adhesion and signaling machinery A Sebé-Pedrós, AJ Roger, FB Lang, N King, I Ruiz-Trillo Proceedings of the National Academy of Sciences 107 (22), 10142-10147, 2010	265	2010
Transcription factor evolution in eukaryotes and the assembly of the regulatory toolkit in multicellular lineages A de Mendoza, A Sebé-Pedrós, MS Šestak, M Matejčić, G Torruella, ... Proceedings of the National Academy of Sciences 110 (50), E4858-E4866, 2013	238	2013
Unexpected Repertoire of Metazoan Transcription Factors in the Unicellular Holozoan Capsaspora owczarzaki A Sebé-Pedrós, A de Mendoza, BF Lang, BM Degnan, I Ruiz-Trillo Molecular biology and evolution 28 (3), 1241-1254, 2011	231	2011
Regulated aggregative multicellularity in a close unicellular relative of metazoa A Sebé-Pedrós, M Irimia, J Del Campo, H Parra-Acero, C Russ, ... Elife 2, e01287, 2013	197	2013
The dynamic regulatory genome of Capsaspora and the origin of animal multicellularity A Sebé-Pedrós, C Ballaré, H Parra-Acero, C Chiva, JJ Tena, E Sabidó, ... Cell 165 (5), 1224-1237, 2016	194	2016
The evolution of the GPCR signaling system in eukaryotes: modularity, conservation, and the transition to metazoan multicellularity A De Mendoza, A Sebe-Pedros, I Ruiz-Trillo Genome biology and evolution 6 (3), 606-619, 2014	193	2014
A stony coral cell atlas illuminates the molecular and cellular basis of coral symbiosis, calcification, and immunity S Levy, A Elek, X Grau-Bové, S Menéndez-Bravo, M Iglesias, A Tanay, ... Cell 184 (11), 2973-2987. e18, 2021	153	2021
Evolution and classification of myosins, a paneukaryotic whole-genome approach A Sebe-Pedros, X Grau-Bove, TA Richards, I Ruiz-Trillo Genome biology and evolution 6 (2), 290-305, 2014	152	2014
Premetazoan Origin of the Hippo Signaling Pathway A Sebé-Pedrós, Y Zheng, I Ruiz-Trillo, D Pan Cell Reports 1 (1), 13-20, 2012	135	2012
Early evolution of the T-box transcription factor family A Sebé-Pedrós, A Ariza-Cosano, MT Weirauch, S Leininger, A Yang, ... Proceedings of the National Academy of Sciences 110 (40), 16050-16055, 2013	100	2013
Insights into the origin of metazoan filopodia and microvilli A Sebé-Pedrós, P Burkhardt, N Sánchez-Pons, SR Fairclough, BF Lang, ... Molecular Biology and Evolution 30 (9), 2013-2023, 2013	90	2013
Global transcriptome analysis of the aphelid Paraphelidium tribonemae supports the phagotrophic origin of fungi G Torruella, X Grau-Bové, D Moreira, SA Karpov, JA Burns, ... Communications Biology 1 (1), 231, 2018	89	2018
The eukaryotic ancestor had a complex ubiquitin signaling system of archaeal origin X Grau-Bové, A Sebé-Pedrós, I Ruiz-Trillo Molecular biology and evolution 32 (3), 726-739, 2015	74	2015
ACME dissociation: a versatile cell fixation-dissociation method for single-cell transcriptomics H García-Castro, NJ Kenny, M Iglesias, P Álvarez-Campos, V Mason, ... Genome biology 22, 1-34, 2021	69	2021
High-throughput proteomics reveals the unicellular roots of animal phosphosignaling and cell differentiation A Sebé-Pedrós, MI Peña, S Capella-Gutiérrez, M Antó, T Gabaldón, ... Developmental cell 39 (2), 186-197, 2016	69	2016

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