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Elena Zotenko
Elena Zotenko
Verified email at garvan.org.au
Title
Cited by
Cited by
Year
Critical evaluation of the Illumina MethylationEPIC BeadChip microarray for whole-genome DNA methylation profiling
R Pidsley, E Zotenko, TJ Peters, MG Lawrence, GP Risbridger, P Molloy, ...
Genome biology 17, 1-17, 2016
11412016
Why do hubs in the yeast protein interaction network tend to be essential: reexamining the connection between the network topology and essentiality
E Zotenko, J Mestre, DP O'Leary, TM Przytycka
PLoS computational biology 4 (8), e1000140, 2008
4702008
Three-dimensional disorganization of the cancer genome occurs coincident with long-range genetic and epigenetic alterations
PC Taberlay, J Achinger-Kawecka, ATL Lun, FA Buske, K Sabir, ...
Genome research 26 (6), 719-731, 2016
3372016
Methylome sequencing in triple-negative breast cancer reveals distinct methylation clusters with prognostic value
C Stirzaker, E Zotenko, JZ Song, W Qu, SS Nair, WJ Locke, A Stone, ...
Nature communications 6 (1), 5899, 2015
2152015
DNA methylation of oestrogen-regulated enhancers defines endocrine sensitivity in breast cancer
A Stone, E Zotenko, WJ Locke, D Korbie, EKA Millar, R Pidsley, ...
Nature communications 6 (1), 7758, 2015
1472015
Predicting domain-domain interactions using a parsimony approach
KS Guimarães, R Jothi, E Zotenko, TM Przytycka
Genome biology 7, 1-14, 2006
1192006
Replication timing and epigenome remodelling are associated with the nature of chromosomal rearrangements in cancer
Q Du, SA Bert, NJ Armstrong, CE Caldon, JZ Song, SS Nair, CM Gould, ...
Nature communications 10 (1), 416, 2019
1092019
Identification of sequence–structure RNA binding motifs for SELEX-derived aptamers
J Hoinka, E Zotenko, A Friedman, ZE Sauna, TM Przytycka
Bioinformatics 28 (12), i215-i223, 2012
1062012
Enduring epigenetic landmarks define the cancer microenvironment
R Pidsley, MG Lawrence, E Zotenko, B Niranjan, A Statham, J Song, ...
Genome research 28 (5), 625-638, 2018
932018
Comprehensive evaluation of genome-wide 5-hydroxymethylcytosine profiling approaches in human DNA
K Skvortsova, E Zotenko, PL Luu, CM Gould, SS Nair, SJ Clark, ...
Epigenetics & chromatin 10, 1-20, 2017
852017
COCO-CL: hierarchical clustering of homology relations based on evolutionary correlations
R Jothi, E Zotenko, A Tasneem, TM Przytycka
Bioinformatics 22 (7), 779-788, 2006
852006
A bioengineered microenvironment to quantitatively measure the tumorigenic properties of cancer-associated fibroblasts in human prostate cancer
AK Clark, AV Taubenberger, RA Taylor, B Niranjan, ZY Chea, E Zotenko, ...
Biomaterials 34 (20), 4777-4785, 2013
762013
DNA hypermethylation encroachment at CpG island borders in cancer is predisposed by H3K4 monomethylation patterns
K Skvortsova, E Masle-Farquhar, PL Luu, JZ Song, W Qu, E Zotenko, ...
Cancer cell 35 (2), 297-314. e8, 2019
752019
Methyl-CpG-binding protein MBD2 plays a key role in maintenance and spread of DNA methylation at CpG islands and shores in cancer
C Stirzaker, JZ Song, W Ng, Q Du, NJ Armstrong, WJ Locke, AL Statham, ...
Oncogene 36 (10), 1328-1338, 2017
732017
Decomposition of overlapping protein complexes: A graph theoretical method for analyzing static and dynamic protein associations
E Zotenko, KS Guimarães, R Jothi, TM Przytycka
Algorithms for Molecular Biology 1, 1-11, 2006
612006
MicroRNA profiling of the pubertal mouse mammary gland identifies miR-184 as a candidate breast tumour suppressor gene
YW Phua, A Nguyen, DL Roden, B Elsworth, N Deng, I Nikolic, J Yang, ...
Breast Cancer Research 17, 1-18, 2015
502015
DNA methylation is required to maintain both DNA replication timing precision and 3D genome organization integrity
Q Du, GC Smith, PL Luu, JM Ferguson, NJ Armstrong, CE Caldon, ...
Cell Reports 36 (12), 2021
412021
Coordinated epigenetic remodelling of transcriptional networks occurs during early breast carcinogenesis
WJ Locke, E Zotenko, C Stirzaker, MD Robinson, RA Hinshelwood, ...
Clinical epigenetics 7, 1-15, 2015
342015
On the applicability of elastic network normal modes in small-molecule docking
M Dietzen, E Zotenko, A Hildebrandt, T Lengauer
Journal of chemical information and modeling 52 (3), 844-856, 2012
342012
Secondary structure spatial conformation footprint: a novel method for fast protein structure comparison and classification
E Zotenko, DP O'Leary, TM Przytycka
BMC Structural Biology 6, 1-12, 2006
342006
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Articles 1–20