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Daniel Portik
Daniel Portik
Staff Bioinformatics Scientist, PacBio
Overená e-mailová adresa na: pacificbiosciences.com - Domovská stránka
Názov
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Citované v
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Evaluating mechanisms of diversification in a Guineo‐Congolian tropical forest frog using demographic model selection
DM Portik, AD Leaché, D Rivera, MF Barej, M Burger, M Hirschfeld, ...
Molecular ecology 26 (19), 5245-5263, 2017
2072017
Generating lineage-resolved, complete metagenome-assembled genomes from complex microbial communities
DM Bickhart, M Kolmogorov, E Tseng, DM Portik, A Korobeynikov, ...
Nature biotechnology 40 (5), 711-719, 2022
1542022
Cryptic diversity of a widespread global pathogen reveals expanded threats to amphibian conservation
AQ Byrne, VT Vredenburg, AN Martel, F Pasmans, RC Bell, DC Blackburn, ...
Proceedings of the National Academy of Sciences 116 (41), 20382-20387, 2019
1242019
An evaluation of transcriptome‐based exon capture for frog phylogenomics across multiple scales of divergence (Class: Amphibia, Order: Anura)
DM Portik, LL Smith, K Bi
Molecular ecology resources 16 (5), 1069-1083, 2016
1072016
Genetics, Morphology, Advertisement Calls, and Historical Records Distinguish Six New Polyploid Species of African Clawed Frog (Xenopus, Pipidae) from West …
BJ Evans, TF Carter, E Greenbaum, V Gvoždík, DB Kelley, PJ McLaughlin, ...
PloS one 10 (12), e0142823, 2015
1032015
Metagenome assembly of high-fidelity long reads with hifiasm-meta
X Feng, H Cheng, D Portik, H Li
Nature methods 19 (6), 671-674, 2022
1002022
Identification of 104 rapidly-evolving nuclear protein-coding markers for amplification across scaled reptiles using genomic resources
DM Portik, PL Wood, JL Grismer, EL Stanley, TR Jackman
Conservation Genetics Resources, 1-10, 2012
842012
Sexual dichromatism drives diversification within a major radiation of African amphibians
DM Portik, RC Bell, DC Blackburn, AM Bauer, CD Barratt, WR Branch, ...
Systematic Biology 68 (6), 859-875, 2019
642019
Evaluation of taxonomic classification and profiling methods for long-read shotgun metagenomic sequencing datasets
DM Portik, CT Brown, NT Pierce-Ward
BMC bioinformatics 23 (1), 541, 2022
632022
Diversity and biogeography of frogs in the genus Amnirana (Anura: Ranidae) across sub-Saharan Africa
GFM Jongsma, MF Barej, CD Barratt, M Burger, W Conradie, R Ernst, ...
Molecular phylogenetics and evolution 120, 274-285, 2018
582018
Historical biogeography resolves the origins of endemic Arabian toad lineages (Anura: Bufonidae): Evidence for ancient vicariance and dispersal events with the Horn of Africa …
DM Portik, TJ Papenfuss
BMC Evolutionary Biology 15, 1-19, 2015
582015
Idiosyncratic responses to climate‐driven forest fragmentation and marine incursions in reed frogs from Central Africa and the Gulf of Guinea Islands
RC Bell, JL Parra, G Badjedjea, MF Barej, DC Blackburn, M Burger, ...
Molecular Ecology 26 (19), 5223-5244, 2017
562017
Vanishing refuge? Testing the forest refuge hypothesis in coastal East Africa using genome‐wide sequence data for seven amphibians
CD Barratt, BA Bwong, R Jehle, HC Liedtke, P Nagel, RE Onstein, ...
Molecular Ecology 27 (21), 4289-4308, 2018
552018
Molecular phylogeny of Panaspis and Afroablepharus skinks (Squamata: Scincidae) in the savannas of sub-Saharan Africa
MF Medina, AM Bauer, WR Branch, A Schmitz, W Conradie, ZT Nagy, ...
Molecular Phylogenetics and Evolution 100, 409-423, 2016
532016
The evolution of reproductive diversity in Afrobatrachia: a phylogenetic comparative analysis of an extensive radiation of African frogs
DM Portik, DC Blackburn
Evolution 70 (9), 2017-2032, 2016
522016
West Africa-A Safe Haven for Frogs? A Sub-Continental Assessment of the Chytrid Fungus (Batrachochytrium dendrobatidis)
J Penner, GB Adum, MT McElroy, T Doherty-Bone, M Hirschfeld, ...
PLOS ONE 8 (2), e56236, 2013
522013
Bridging the gap: western rock skinks (Trachylepis sulcata) have a short history in South Africa
DM Portik, AM Bauer, TR Jackman
Molecular Ecology 20 (8), 1744-1758, 2011
522011
A new species of Lygodactylus (Squamata: Gekkonidae) endemic to Mount Namuli, an isolated ‘sky island’of northern Mozambique
DM Portik, SL Travers, AM Bauer, WR Branch
Zootaxa 3710 (5), 415-435, 2013
492013
Monitors cross the Red Sea: The biogeographic history of Varanus yemenensis
DM Portik, TJ Papenfuss
Molecular Phylogenetics and Evolution, 2012
492012
FrogCap: A modular sequence capture probe‐set for phylogenomics and population genetics for all frogs, assessed across multiple phylogenetic scales
CR Hutter, KA Cobb, DM Portik, SL Travers, PL Wood Jr, RM Brown
Molecular Ecology Resources 22 (3), 1100-1119, 2022
482022
Systém momentálne nemôže vykonať operáciu. Skúste to neskôr.
Články 1–20