Large-scale sequence comparisons with sourmash NT Pierce, L Irber, T Reiter, P Brooks, CT Brown F1000Research 8, 2019 | 175* | 2019 |
Dietary variation and evolution of gene copy number among dog breeds T Reiter, E Jagoda, TD Capellini PloS one 11 (2), e0148899, 2016 | 56 | 2016 |
Lightweight compositional analysis of metagenomes with FracMinHash and minimum metagenome covers L Irber, PT Brooks, T Reiter, NT Pierce-Ward, MR Hera, D Koslicki, ... BioRxiv, 2022.01. 11.475838, 2022 | 55 | 2022 |
Exploring neighborhoods in large metagenome assembly graphs using spacegraphcats reveals hidden sequence diversity CT Brown, D Moritz, MP O’Brien, F Reidl, T Reiter, BD Sullivan Genome biology 21, 1-16, 2020 | 48 | 2020 |
Chronic hyperandrogenemia in the presence and absence of a western-style diet impairs ovarian and uterine structure/function in young adult rhesus monkeys CV Bishop, EC Mishler, DL Takahashi, TE Reiter, KR Bond, CA True, ... Human Reproduction 33 (1), 128-139, 2018 | 45 | 2018 |
Eukaryotic genomes from a global metagenomic data set illuminate trophic modes and biogeography of ocean plankton H Alexander, SK Hu, AI Krinos, M Pachiadaki, BJ Tully, CJ Neely, T Reiter mBio 14 (6), e01676-23, 2023 | 42 | 2023 |
Streamlining data-intensive biology with workflow systems T Reiter, PT Brooks, L Irber, SEK Joslin, CM Reid, C Scott, CT Brown, ... GigaScience 10 (1), giaa140, 2021 | 42 | 2021 |
Prebiotic Oligosaccharides Potentiate Host Protective Responses against L. Monocytogenes Infection P Chen, T Reiter, B Huang, N Kong, BC Weimer Pathogens 6 (4), 68, 2017 | 34 | 2017 |
Chronically elevated androgen and/or consumption of a Western-style diet impairs oocyte quality and granulosa cell function in the nonhuman primate periovulatory follicle CV Bishop, TE Reiter, DW Erikson, CB Hanna, BL Daughtry, SL Chavez, ... Journal of assisted reproduction and genetics 36, 1497-1511, 2019 | 30 | 2019 |
Reproducibility of elemental profile across two vintages in Pinot noir wines from fourteen different vineyard sites MMM Lima, D Hernandez, A Yeh, T Reiter, RC Runnebaum Food Research International 141, 110045, 2021 | 28 | 2021 |
Nuclear mRNA metabolism drives selective basket assembly on a subset of nuclear pore complexes in budding yeast P Bensidoun, T Reiter, B Montpetit, D Zenklusen, M Oeffinger Molecular cell 82 (20), 3856-3871. e6, 2022 | 26 | 2022 |
A nuclear role for the DEAD-box protein Dbp5 in tRNA export A Lari, A Arul Nambi Rajan, R Sandhu, T Reiter, R Montpetit, BP Young, ... Elife 8, e48410, 2019 | 24 | 2019 |
Comparative immunogenomics of canine natural killer cells as immunotherapy target AA Gingrich, TE Reiter, SJ Judge, D York, M Yanagisawa, A Razmara, ... Frontiers in Immunology 12, 670309, 2021 | 18 | 2021 |
Altered rRNA processing disrupts nuclear RNA homeostasis via competition for the poly (A)-binding protein Nab2 LC Aguilar, B Paul, T Reiter, L Gendron, A Arul Nambi Rajan, R Montpetit, ... Nucleic acids research 48 (20), 11675-11694, 2020 | 14 | 2020 |
Saccharomyces cerevisiae gene expression during fermentation of Pinot Noir wines at an industrially relevant scale T Reiter, R Montpetit, S Byer, I Frias, E Leon, R Viano, M Mcloughlin, ... Applied and environmental microbiology 87 (11), e00036-21, 2021 | 11 | 2021 |
Compendium-wide analysis of Pseudomonas aeruginosa core and accessory genes reveals transcriptional patterns across strains PAO1 and PA14 AJ Lee, G Doing, SL Neff, T Reiter, DA Hogan, CS Greene MSystems 8 (1), e00342-22, 2023 | 10 | 2023 |
Pityriasis rubra pilaris transcriptomics implicate T helper 17 signaling and correlate with response to ixekizumab, with distinct gene expression profiles in nonresponders D Haynes, T Reiter, R Velasco, M Chang, R Kulkarni, G Kent, J Strunck, ... Journal of Investigative Dermatology 143 (3), 501-504. e1, 2023 | 9 | 2023 |
Creating reproducible workflows for complex computational pipelines FM Celebi, EA McDaniel, T Reiter Arcadia Science, 2023 | 7 | 2023 |
Computationally efficient assembly of Pseudomonas aeruginosa gene expression compendia G Doing, AJ Lee, SL Neff, T Reiter, JD Holt, BA Stanton, CS Greene, ... Msystems 8 (1), e00341-22, 2023 | 7* | 2023 |
Transcriptomics provides a genetic signature of vineyard site and offers insight into vintage-independent inoculated fermentation outcomes T Reiter, R Montpetit, S Byer, I Frias, E Leon, R Viano, M Mcloughlin, ... Msystems 6 (2), 10.1128/msystems. 00033-21, 2021 | 7* | 2021 |