Nikki E. Freed
Nikki E. Freed
Overená e-mailová adresa na: - Domovská stránka
Citované v
Citované v
Self-destructive cooperation mediated by phenotypic noise
M Ackermann, B Stecher, NE Freed, P Songhet, WD Hardt, M Doebeli
Nature 454 (7207), 987-990, 2008
Rapid identification and strain-typing of respiratory pathogens for epidemic surveillance
DJ Ecker, R Sampath, LB Blyn, MW Eshoo, C Ivy, JA Ecker, B Libby, ...
Proceedings of the National Academy of Sciences 102 (22), 8012-8017, 2005
Transmission dynamics and prospective environmental sampling of adenovirus in a military recruit setting
KL Russell, MP Broderick, SE Franklin, LB Blyn, NE Freed, E Moradi, ...
The Journal of Infectious Diseases 194 (7), 877-885, 2006
Rapid and inexpensive whole-genome sequencing of SARS-CoV-2 using 1200 bp tiled amplicons and Oxford Nanopore Rapid Barcoding
NE Freed, M Vlková, MB Faisal, OK Silander
Biology Methods and Protocols 5 (1), bpaa014, 2020
Tracking the international spread of SARS-CoV-2 lineages B. 1.1. 7 and B. 1.351/501Y-V2 with grinch
Á O'Toole, V Hill, OG Pybus, A Watts, II Bogoch, K Khan, JP Messina, ...
Wellcome Open Research 6, 2021
A simple screen to identify promoters conferring high levels of phenotypic noise
NE Freed, OK Silander, B Stecher, A Böhm, WD Hardt, M Ackermann
PLoS genetics 4 (12), e1000307, 2008
Testing the advantages and disadvantages of short-and long-read eukaryotic metagenomics using simulated reads
WS Pearman, NE Freed, OK Silander
BMC bioinformatics 21 (1), 1-15, 2020
Rapid detection and molecular serotyping of adenovirus by use of PCR followed by electrospray ionization mass spectrometry
LB Blyn, TA Hall, B Libby, R Ranken, R Sampath, K Rudnick, E Moradi, ...
Journal of clinical microbiology 46 (2), 644-651, 2008
Molecular analysis of adenovirus isolates from vaccinated and unvaccinated young adults
DA Blasiole, D Metzgar, LT Daum, MAK Ryan, J Wu, C Wills, CT Le, ...
Journal of clinical microbiology 42 (4), 1686-1693, 2004
Co-infections of adenovirus species in previously vaccinated patients
GJ Vora, B Lin, K Gratwick, C Meador, C Hansen, C Tibbetts, DA Stenger, ...
Emerging infectious diseases 12 (6), 921, 2006
Use of genomics to track coronavirus disease outbreaks, New Zealand
JL Geoghegan, J Douglas, X Ren, M Storey, J Hadfield, OK Silander, ...
Emerging Infectious Diseases 27 (5), 1317, 2021
Effectiveness of the 2003–2004 influenza vaccine among US military basic trainees: a year of suboptimal match between vaccine and circulating strain
KL Russell, MAK Ryan, A Hawksworth, NE Freed, M Irvine, LT Daum, ...
Vaccine 23 (16), 1981-1985, 2005
Combining Shigella Tn-seq data with gold-standard E. coli gene deletion data suggests rare transitions between essential and non-essential gene functionality
NE Freed, D Bumann, OK Silander
BMC Microbiology 16 (203), 1-14, 2016
Creation of a dense transposon insertion library using bacterial conjugation in enterobacterial strains such as Escherichia coli or Shigella flexneri
NE Freed
JoVE (Journal of Visualized Experiments), e56216, 2017
Diagnostic discrimination of live attenuated influenza vaccine strains and community-acquired pathogenic strains in clinical samples
NE Freed, CA Myers, KL Russell, EA Walter, M Irvine, RG Coon, ...
Molecular and cellular probes 21 (2), 103-110, 2007
Concordant geographic and genetic structure revealed by genotyping‐by‐sequencing in a New Zealand marine isopod
WS Pearman, SJ Wells, OK Silander, NE Freed, J Dale
Ecology and Evolution 10 (24), 13624-13639, 2020
SARS-CoV2 genome sequencing protocol (1200bp amplicon" midnight" primer set, using Nanopore Rapid kit)
N Freed, O Silander
New tools for diet analysis: nanopore sequencing of metagenomic DNA from rat stomach contents to quantify diet
N Freed, W Pearman, A Smith, G Breckell, J Dale, O Silander
Authorea Preprints, 2020
Complete genome sequences of cluster a mycobacteriophages BobSwaget, Fred313, KADY, Lokk, MyraDee, Stagni, and StepMih
KA Butela, SMR Gurney, HL Hendrickson, JM LeBlanc-Straceski, ...
Genome Announcements 5 (43), 10.1128/genomea. 01182-17, 2017
Surveillance for febrile respiratory infections during Cobra Gold 2003
J Fuller, K Hanley, R Schultz, M Lewis, NE Freed, M Ellis, V Ngauy, ...
Military medicine 171 (5), 357-359, 2006
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Články 1–20